tRNA genes clustered and arranged according to each identical group

Marine metagenome, Gulf of Maine surface waters

Anticodon = CTC

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.242073 (30 seq.)
>WENV180590453 OCOT01021421 [OCOT] marine metagenome; ENVO:00002010 395 470 + Glu CTC [ENA] ¢þ
>WENV181309262 OFIV01000436 [OFIV] marine metagenome; seawater 722 648 - Glu CTC [ENA] ¢þ
>WENV181315711 OFJQ01003046 [OFJQ] marine metagenome; seawater 736 661 - Glu CTC [ENA] ¢þ
>WENV181316431 OFJU01001649 [OFJU] marine metagenome; seawater 494 569 + Glu CTC [ENA] ¢þ
>WENV181318677 OFKA01006586 [OFKA] marine metagenome; seawater 369 294 - Glu CTC [ENA] ¢þ
>WENV181320675 OFKI01007082 [OFKI] marine metagenome; seawater 717 642 - Glu CTC [ENA] ¢þ
>WENV181321890 OFKN01027616 [OFKN] marine metagenome; seawater 301 226 - Glu CTC [ENA] ¢þ
>WENV181392561 OFRW01082065 [OFRW] seawater metagenome; seawater 282 207 - Glu CTC [ENA] ¢þ
>WENV182560597 OJDU01009313 [OJDU] seawater metagenome; Sea water 600 526 - Glu CTC [ENA] ¢þ
>WENV183622192 OOFV01011409 [OOFV] marine metagenome; seawater 568 493 - Glu CTC [ENA] ¢þ
>WENV183626600 OOGJ01001135 [OOGJ] marine metagenome; seawater 636 561 - Glu CTC [ENA] ¢þ
>WENV183627290 OOGK01086600 [OOGK] marine metagenome; seawater 282 207 - Glu CTC [ENA] ¢þ
>WENV183630356 OOGS01005685 [OOGS] marine metagenome; seawater 538 613 + Glu CTC [ENA] ¢þ
>WENV170294809 CESC01166077 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 998 1073 + Glu CTC [ENA] ¢þ
>WENV170478525 CEVK01059717 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 213 288 + Glu CTC [ENA] ¢þ
>WENV170487154 CEVO01030807 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 394 319 - Glu CTC [ENA] ¢þ
>WENV170568888 FLMP01093129 [FLMP] seawater metagenome; seawater 503 578 + Glu CTC [ENA] ¢þ
>WENV170616593 FUWD012893034 [FUWD] metagenome; unknown 306 232 - Glu CTC [ENA] ¢þ
>WENV170619703 FUWD013019404 [FUWD] metagenome; unknown 516 442 - Glu CTC [ENA] ¢þ
>WENV170627824 FUWD013237792 [FUWD] metagenome; unknown 516 442 - Glu CTC [ENA] ¢þ
>WENV170763566 LWDU01012559 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1332 1406 + Glu CTC [ENA] ¢þ
>WENV170763938 LWDU01025192 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1777 1703 - Glu CTC [ENA] ¢þ
>WENV170952913 MEHZ011620443 [MEHZ] marine metagenome; marine surface water 433 359 - Glu CTC [ENA] ¢þ
>WENV170952918 MEHZ011620906 [MEHZ] marine metagenome; marine surface water 1648 1573 - Glu CTC [ENA] ¢þ
>WENV170953229 MEHZ011635007 [MEHZ] marine metagenome; marine surface water 1493 1567 + Glu CTC [ENA] ¢þ
>ENV09004335 ADKQ01006593 Marine metagenome apWin_C1 814 739 - Glu CTC [ENA] ¡û
>WENV11101379 AGBE01002123 Marine metagenome, Gulf of Maine surface waters 6199 6274 + Glu CTC [ENA] ¡û
>WENV11101380 AGBE01002124 Marine metagenome, Gulf of Maine surface waters 2359 2433 + Glu CTC [ENA] ¡û
>W1610597521 LFEY01000017 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 2786 2860 + Glu CTC [ENA] ¡û
>W1610625314 LIAL01000003 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 2542 2617 + Glu CTC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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