tRNA genes clustered and arranged according to each identical group

Marine metagenome apWin_C1

Anticodon = TTT

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.452976 (44 seq.)
>W131159812 AQVV01000009 Nitrospinota Candidatus Nitromaritima sp. AB-629-B18 AB-629-B18 [AQVV] 7955 8028 + Lys TTT [ENA] ¡û
>WENV180048840 MPLU02015784 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 449 521 + Lys TTT [ENA] ¢þ
>WENV180053476 MPLV02019122 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1068 1141 + Lys TTT [ENA] ¢þ
>WENV180054219 MPLV02075626 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 407 480 + Lys TTT [ENA] ¢þ
>WENV180055599 MPLV02170556 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1246 1173 - Lys TTT [ENA] ¢þ
>WENV180057157 MPLW02082184 [MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter 629 556 - Lys TTT [ENA] ¢þ
>WENV180058613 MPLX02064328 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 715 642 - Lys TTT [ENA] ¢þ
>WENV180060478 MPLX02171491 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 7090 7017 - Lys TTT [ENA] ¢þ
>WENV180061302 MPLX02216811 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 222 149 - Lys TTT [ENA] ¢þ
>WENV180062345 MPLX02281218 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 15936 15863 - Lys TTT [ENA] ¢þ
>WENV180066836 MPLY02158584 [MPLY] marine metagenome; 140 m water sample filtered on 0.2 um supor filter 331 404 + Lys TTT [ENA] ¢þ
>WENV180089881 MPMF02108485 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 199 126 - Lys TTT [ENA] ¢þ
>WENV180091127 MPMF02176158 [MPMF] marine metagenome; 120 m water sample prefiltered with 30 um filter, filtered on to 0.2 um supor filter 263 190 - Lys TTT [ENA] ¢þ
>WENV181210668 OFBH01022352 [OFBH] metagenome; hydrothermal vent 103 176 + Lys TTT [ENA] ¢þ
>WENV181314176 OFJJ01003946 [OFJJ] marine metagenome; seawater 1015 941 - Lys TTT [ENA] ¢þ
>WENV183798798 PVBE010450427 [PVBE] marine metagenome; water 2447 2374 - Lys TTT [ENA] ¢þ
>WENV183802041 PVBE010728162 [PVBE] marine metagenome; water 729 656 - Lys TTT [ENA] ¢þ
>WENV183804257 PVBE010913385 [PVBE] marine metagenome; water 1842 1915 + Lys TTT [ENA] ¢þ
>WENV183810038 PVBE011443985 [PVBE] marine metagenome; water 487 414 - Lys TTT [ENA] ¢þ
>WENV170143581 CENY01081868 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 11 84 + Lys TTT [ENA] ¢þ
>WENV170203583 CEPS01068222 [CEPS] marine metagenome genome assembly TARA_038_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 214 287 + Lys TTT [ENA] ¢þ
>WENV170501614 CEVU01140144 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 683 756 + Lys TTT [ENA] ¢þ
>WENV170571699 FLOH01000271 [FLOH] marine metagenome; water 11629 11557 - Lys TTT [ENA] ¢þ
>WENV170597868 FUWD010017218 [FUWD] metagenome; unknown 188 115 - Lys TTT [ENA] ¢þ
>WENV170603645 FUWD010324446 [FUWD] metagenome; unknown 335 408 + Lys TTT [ENA] ¢þ
>WENV170606955 FUWD010757164 [FUWD] metagenome; unknown 205 133 - Lys TTT [ENA] ¢þ
>WENV170616559 FUWD012891134 [FUWD] metagenome; unknown 129 56 - Lys TTT [ENA] ¢þ
>WENV170624424 FUWD013181339 [FUWD] metagenome; unknown 884 811 - Lys TTT [ENA] ¢þ
>WENV170624483 FUWD013182277 [FUWD] metagenome; unknown 240 313 + Lys TTT [ENA] ¢þ
>WENV170632712 FUWD013386323 [FUWD] metagenome; unknown 884 811 - Lys TTT [ENA] ¢þ
>WENV170632768 FUWD013387070 [FUWD] metagenome; unknown 240 313 + Lys TTT [ENA] ¢þ
>WENV170662956 JYMV01000134 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 84 10 - Lys TTT [ENA] ¢þ
>WENV170663084 JYMV01001665 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 1323 1250 - Lys TTT [ENA] ¢þ
>WENV170663856 JYMV01010092 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 2634 2560 - Lys TTT [ENA] ¢þ
>WENV170664424 JYMV01016135 [JYMV] hydrothermal vent metagenome; Hydrothermal plumes at the Eastern Lau Spreading Center, Western Pacific Ocean 1394 1321 - Lys TTT [ENA] ¢þ
>WENV170741437 LULS01034472 [LULS] marine metagenome; Red Sea water column Station 108 - depth 200m 122 49 - Lys TTT [ENA] ¢þ
>WENV170748239 LUMD01008479 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 666 739 + Lys TTT [ENA] ¢þ
>WENV170762612 LUMW01018787 [LUMW] marine metagenome; Red Sea water column Station 192 - depth 500m 309 236 - Lys TTT [ENA] ¢þ
>SRA1008961 SRR020491.78143 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 190 117 - Lys TTT [SRA]
>SRA1009842 SRR020491.372800 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 275 202 - Lys TTT [SRA]
>ENV09004319 ADKQ01005652 Marine metagenome apWin_C1 742 669 - Lys TTT [ENA] ¡û
>W1610599276 LFLA01000021 Nitrospinota Nitrospina sp. LS_NOB [LFLA] 21788 21714 - Lys TTT [ENA] ¡û
>WENV081132 ABEF01030102 Marine planktonic communities from Hawaii Ocean Times Series Station (HOT/ALOHA) 65 142 + Lys TTT [ENA]
>W1710720708 LFLA01000021 Nitrospinota Nitrospina sp. LS_NOB [LFLA] 21788 21714 - Lys TTT [ENA] ¡û
Identical group No.459422 (73 seq.)
>WENV180101568 OAOV01012901 [OAOV] marine metagenome; ENVO:00002010 218 293 + Lys TTT [ENA] ¢þ
>WENV180113811 OAPR01028894 [OAPR] marine metagenome; seawater 402 477 + Lys TTT [ENA] ¢þ
>WENV180299755 OBJC01110177 [OBJC] metagenome; water 35 110 + Lys TTT [ENA] ¢þ
>WENV180356887 OBNL01064772 [OBNL] marine metagenome; ENVO:00002010 259 184 - Lys TTT [ENA] ¢þ
>WENV180367628 OBOE01185128 [OBOE] marine metagenome; ENVO:00002010 259 184 - Lys TTT [ENA] ¢þ
>WENV180383513 OBOU01132333 [OBOU] marine metagenome; ENV:00002010 175 250 + Lys TTT [ENA] ¢þ
>WENV180383644 OBOV01003931 [OBOV] marine metagenome; ENV:00002010 944 869 - Lys TTT [ENA] ¢þ
>WENV180383645 OBOV01003931 [OBOV] marine metagenome; ENV:00002010 729 654 - Lys TTT [ENA] ¢þ
>WENV180396476 OBPV01007862 [OBPV] marine metagenome; ENVO:00002010 670 595 - Lys TTT [ENA] ¢þ
>WENV180585102 OCOK01002852 [OCOK] marine metagenome; ENVO:00002010 422 347 - Lys TTT [ENA] ¢þ
>WENV180590317 OCOT01000080 [OCOT] marine metagenome; ENVO:00002010 3277 3202 - Lys TTT [ENA] ¢þ
>WENV181313705 OFJH01001607 [OFJH] marine metagenome; seawater 737 662 - Lys TTT [ENA] ¢þ
>WENV181313706 OFJH01001607 [OFJH] marine metagenome; seawater 522 447 - Lys TTT [ENA] ¢þ
>WENV181319238 OFKD01001422 [OFKD] marine metagenome; seawater 52 127 + Lys TTT [ENA] ¢þ
>WENV181325401 OFLJ01000331 [OFLJ] seawater metagenome; seawater 3381 3306 - Lys TTT [ENA] ¢þ
>WENV181391140 OFRQ01044914 [OFRQ] seawater metagenome; seawater 410 335 - Lys TTT [ENA] ¢þ
>WENV181392099 OFRW01001220 [OFRW] seawater metagenome; seawater 1949 2024 + Lys TTT [ENA] ¢þ
>WENV182543165 OJBA01001357 [OJBA] seawater metagenome; Sea water 313 388 + Lys TTT [ENA] ¢þ
>WENV182548133 OJBV01000686 [OJBV] seawater metagenome; Sea water 2928 2853 - Lys TTT [ENA] ¢þ
>WENV182550577 OJCA01012565 [OJCA] seawater metagenome; Sea water 194 269 + Lys TTT [ENA] ¢þ
>WENV182551217 OJCC01000008 [OJCC] seawater metagenome; Sea water 13823 13748 - Lys TTT [ENA] ¢þ
>WENV182554179 OJCT01008834 [OJCT] seawater metagenome; Sea water 739 814 + Lys TTT [ENA] ¢þ
>WENV182554285 OJCU01000553 [OJCU] seawater metagenome; Sea water 1513 1588 + Lys TTT [ENA] ¢þ
>WENV182562753 OJEA01001171 [OJEA] seawater metagenome; Sea water 3094 3019 - Lys TTT [ENA] ¢þ
>WENV182563663 OJEC01011564 [OJEC] seawater metagenome; Sea water 807 732 - Lys TTT [ENA] ¢þ
>WENV182564983 OJEF01022759 [OJEF] seawater metagenome; Sea water 141 216 + Lys TTT [ENA] ¢þ
>WENV182565241 OJEH01000630 [OJEH] seawater metagenome; Sea water 7326 7251 - Lys TTT [ENA] ¢þ
>WENV182565242 OJEH01000630 [OJEH] seawater metagenome; Sea water 7111 7036 - Lys TTT [ENA] ¢þ
>WENV182568464 OJEU01001365 [OJEU] seawater metagenome; Sea water 931 1006 + Lys TTT [ENA] ¢þ
>WENV182569372 OJEZ01000023 [OJEZ] seawater metagenome; Sea water 29658 29733 + Lys TTT [ENA] ¢þ
>WENV182570276 OJFC01000737 [OJFC] seawater metagenome; Sea water 3162 3237 + Lys TTT [ENA] ¢þ
>WENV182570756 OJFF01000291 [OJFF] seawater metagenome; Sea water 194 269 + Lys TTT [ENA] ¢þ
>WENV182571483 OJFK01000106 [OJFK] seawater metagenome; Sea water 18452 18377 - Lys TTT [ENA] ¢þ
>WENV182574054 OJFQ01015147 [OJFQ] seawater metagenome; Sea water 105 180 + Lys TTT [ENA] ¢þ
>WENV182575489 OJFV01000002 [OJFV] seawater metagenome; Sea water 170105 170030 - Lys TTT [ENA] ¢þ
>WENV182578112 OJGM01002198 [OJGM] seawater metagenome; Sea water 1444 1369 - Lys TTT [ENA] ¢þ
>WENV182578382 OJGN01002258 [OJGN] seawater metagenome; Sea water 555 480 - Lys TTT [ENA] ¢þ
>WENV182583865 OJHF01000193 [OJHF] seawater metagenome; Sea water 16786 16711 - Lys TTT [ENA] ¢þ
>WENV182587119 OJHL01001274 [OJHL] seawater metagenome; Sea water 1621 1546 - Lys TTT [ENA] ¢þ
>WENV182589703 OJIG01000059 [OJIG] seawater metagenome; Sea water 194 269 + Lys TTT [ENA] ¢þ
>WENV182589747 OJIG01000179 [OJIG] seawater metagenome; Sea water 7021 7096 + Lys TTT [ENA] ¢þ
>WENV182590035 OJIH01000029 [OJIH] seawater metagenome; Sea water 18026 18101 + Lys TTT [ENA] ¢þ
>WENV182590486 OJII01006384 [OJII] seawater metagenome; Sea water 437 362 - Lys TTT [ENA] ¢þ
>WENV182592120 OJIQ01000205 [OJIQ] seawater metagenome; Sea water 2509 2584 + Lys TTT [ENA] ¢þ
>WENV182594190 OJIV01001282 [OJIV] seawater metagenome; Sea water 8413 8338 - Lys TTT [ENA] ¢þ
>WENV183055736 OLHF01001254 [OLHF] seawater metagenome; Sea water 200 275 + Lys TTT [ENA] ¢þ
>WENV183055799 OLHH01000432 [OLHH] seawater metagenome; Sea water 4128 4203 + Lys TTT [ENA] ¢þ
>WENV183060410 OLHX01008899 [OLHX] seawater metagenome; Sea water 772 697 - Lys TTT [ENA] ¢þ
>WENV183619265 OOFQ01000325 [OOFQ] marine metagenome; seawater 3381 3306 - Lys TTT [ENA] ¢þ
>WENV183625112 OOGF01000769 [OOGF] marine metagenome; seawater 430 355 - Lys TTT [ENA] ¢þ
>WENV183625113 OOGF01000769 [OOGF] marine metagenome; seawater 215 140 - Lys TTT [ENA] ¢þ
>WENV183626246 OOGH01045610 [OOGH] marine metagenome; seawater 410 335 - Lys TTT [ENA] ¢þ
>WENV183626421 OOGI01003510 [OOGI] marine metagenome; seawater 822 897 + Lys TTT [ENA] ¢þ
>WENV183626809 OOGK01001262 [OOGK] marine metagenome; seawater 1949 2024 + Lys TTT [ENA] ¢þ
>WENV183630332 OOGS01004180 [OOGS] marine metagenome; seawater 727 802 + Lys TTT [ENA] ¢þ
>WENV170296621 CESE01028894 [CESE] marine metagenome genome assembly TARA_085_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 450 375 - Lys TTT [ENA] ¢þ
>WENV170538453 CEWR01081875 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 168 243 + Lys TTT [ENA] ¢þ
>WENV170567442 FLMP01000573 [FLMP] seawater metagenome; seawater 11190 11115 - Lys TTT [ENA] ¢þ
>WENV170567443 FLMP01000573 [FLMP] seawater metagenome; seawater 10975 10900 - Lys TTT [ENA] ¢þ
>WENV170613330 FUWD012796914 [FUWD] metagenome; unknown 527 452 - Lys TTT [ENA] ¢þ
>WENV170613331 FUWD012796914 [FUWD] metagenome; unknown 312 237 - Lys TTT [ENA] ¢þ
>WENV170646759 JQIA01002743 [JQIA] marine sediment metagenome; oil-polluted sediment collected from 3 locations (0.5 km, 0.7 km and 0.9 km) around wellhead 9324 9397 + Lys TTT [ENA] ¢þ
>WENV170764109 LWDU01030384 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 582 657 + Lys TTT [ENA] ¢þ
>WENV170821020 MDSY01014938 [MDSY] marine metagenome; seawater 292 217 - Lys TTT [ENA] ¢þ
>WENV170821021 MDSY01014938 [MDSY] marine metagenome; seawater 77 2 - Lys TTT [ENA] ¢þ
>WENV170824802 MDSY01082501 [MDSY] marine metagenome; seawater 23 98 + Lys TTT [ENA] ¢þ
>WENV170953764 MEHZ011662868 [MEHZ] marine metagenome; marine surface water 971 896 - Lys TTT [ENA] ¢þ
>WENV170953806 MEHZ011664439 [MEHZ] marine metagenome; marine surface water 20 95 + Lys TTT [ENA] ¢þ
>ENV09004278 ADKQ01001127 Marine metagenome apWin_C1 457 382 - Lys TTT [ENA] ¡û
>W1511576956 LAQF01000008 Gammaproteobacteria Oceanospirillaceae bacterium ASP10-02a [LAQF] 35419 35494 + Lys TTT [ENA] ¡û
>W1511576957 LAQF01000008 Gammaproteobacteria Oceanospirillaceae bacterium ASP10-02a [LAQF] 35618 35693 + Lys TTT [ENA] ¡û
>WENV074396 AACY023973401 Marine microbial communities from Global Ocean Sampling (GOS) 207 284 + Lys TTT [ENA]
>WENV074397 AACY023973401 Marine microbial communities from Global Ocean Sampling (GOS) 422 499 + Lys TTT [ENA]
Identical group No.528417 (1 seq.)
>ENV09004358 ADKQ01008607 Marine metagenome apWin_C1 643 715 + Lys TTT [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK