tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = CAA

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.48042 (6 seq.)
>WENV170017246 BART01003991 [BART] marine sediment metagenome; marine subsurface sediment at 5.1 meters below seafloor (mbsf), off the Shimokita Peninsula 472 560 + Leu CAA [ENA] ¢þ
>WENV170017880 BARU01036308 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 210 299 + Leu CAA [ENA] ¢þ
>WENV170647812 JREQ01005867 [JREQ] marine sediment metagenome; clay from marine sediments 31 meters below sea floor depth collected from drilling site U1352C 1928 2016 + Leu CAA [ENA] ¢þ
>WENV170648072 JRER01003860 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 1151 1063 - Leu CAA [ENA] ¢þ
>WENV170648079 JRER01004174 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 215 303 + Leu CAA [ENA] ¢þ
>SRA1002354 SRR001322.61757 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 107 21 - Leu CAA [SRA]
Identical group No.51915 (1 seq.)
>SRA1002518 SRR001325.76304 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 93 7 - Leu CAA [SRA]
Identical group No.63847 (5 seq.)
>WENV180012928 FMSI01032503 [FMSI] soil metagenome; Soil 1 88 + Leu CAA [ENA] ¢þ
>WENV180036561 FVAA010170232 [FVAA] soil metagenome; Soil 45 132 + Leu CAA [ENA] ¢þ
>WENV181409243 OGCI01000050 [OGCI] hot springs metagenome; Hot spring water 134461 134374 - Leu CAA [ENA] ¢þ
>WENV181416130 OGCL01054653 [OGCL] hot springs metagenome; Hot spring water 319 406 + Leu CAA [ENA] ¢þ
>SRA1002458 SRR001324.26299 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 25 112 + Leu CAA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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