tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = GTA

HIT: 5 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.77596 (1 seq.)
>SRA1002548 SRR001326.49788 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 106 18 - Tyr GTA [SRA]
Identical group No.101942 (1 seq.)
>SRA1002487 SRR001324.89229 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 29 116 + Tyr GTA [SRA]
Identical group No.112638 (19 seq.)
>W131162445 AQYX01000021 candidate division OP9 candidate division OP9 bacterium SCGC AAA252-M02 [AQYX] 1087 1173 + Tyr GTA [ENA]
>W131193776 ASPA01000068 candidate division OP9 candidate division OP9 bacterium SCGC AAA255-G05 [ASPA] 148 62 - Tyr GTA [ENA]
>W131193785 ASPB01000007 candidate division OP9 candidate division OP9 bacterium SCGC AB-164-D21 [ASPB] 30458 30372 - Tyr GTA [ENA]
>W131193809 ASPC01000051 candidate division OP9 candidate division OP9 bacterium SCGC AAA255-N14 [ASPC] 6529 6443 - Tyr GTA [ENA]
>WENV170004704 AHKK01008302 [AHKK] sediment metagenome; Nyegga cold-seep field located at the mid-Norwegian margin on the northern edge of the Storegga 1094 1008 - Tyr GTA [ENA]
>WENV170017677 BARU01011598 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 106 192 + Tyr GTA [ENA]
>WENV170018417 BARW01013277 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 396 310 - Tyr GTA [ENA]
>WENV170018481 BARW01026292 [BARW] marine sediment metagenome; marine subsurface sediment at 107.0 meters below seafloor (mbsf), off the Shimokita Peninsula 697 611 - Tyr GTA [ENA]
>WENV170677265 LDZT01004588 [LDZT] terrestrial metagenome; oil reservoir sample SB1 345 259 - Tyr GTA [ENA]
>WENV170693656 LGVC01036610 [LGVC] marine sediment metagenome; sample #5133, Elevator 3A push core 47, collected at Hydrate Ridge North during Jason II dive 539 625 + Tyr GTA [ENA]
>WENV170694437 LGVD01057631 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 93 7 - Tyr GTA [ENA]
>WENV170697003 LGVF01071777 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 640 726 + Tyr GTA [ENA]
>WENV170698653 LGVF01382155 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 360 446 + Tyr GTA [ENA]
>W1910702406 MEYH01000103 CandidatusAtribacteria Candidatus Atribacteria bacterium RBG_19FT_COMBO_35_14 (MEYH) 4987 5073 + Tyr GTA [ENA]
>W1910870316 NCRO01000110 CandidatusAtribacteria Candidatus Atribacteria bacterium RS-JS1 (NCRO) 232 146 - Tyr GTA [ENA]
>SRA1002507 SRR001325.36792 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 117 31 - Tyr GTA [SRA]
>SRA1036365 SRR035089.502324 454 Sequencing (SRP001810) 179 265 + Tyr GTA [SRA]
>W1610613593 LGGA01000021 CandidatusAtribacteria Atribacteria bacterium 34_128 (LGGA) 345 259 - Tyr GTA [ENA]
>W1710734765 LGGA01000021 CandidatusAtribacteria Atribacteria bacterium 34_128 (LGGA) 345 259 - Tyr GTA [ENA]
Identical group No.150966 (1 seq.)
>SRA1002428 SRR001323.117340 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 11 95 + Tyr GTA [SRA]
Identical group No.381060 (1 seq.)
>SRA1002470 SRR001324.51924 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 23 99 + Tyr GTA [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
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