tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = TCC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.375980 (4 seq.)
>WENV170647978 JRER01001818 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 2038 2113 + Gly TCC [ENA] ¢þ
>WENV170648033 JRER01002927 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 1621 1546 - Gly TCC [ENA] ¢þ
>WENV170648113 JRER01004966 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 3362 3437 + Gly TCC [ENA] ¢þ
>SRA1002435 SRR001323.139891 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 104 29 - Gly TCC [SRA]
Identical group No.419147 (18 seq.)
>W1711584122 MNYD01000060 Chloroflexota Dehalococcoidia bacterium CG2_30_46_19 [MNYD] 6008 5937 - Gly TCC [ENA] ¡û
>W1711584173 MNYE01000117 Chloroflexota Dehalococcoidia bacterium CG2_30_46_9 [MNYE] 7385 7459 + Gly TCC [ENA] ¡û
>WENV181409994 OGCI01001105 [OGCI] hot springs metagenome; Hot spring water 7068 6994 - Gly TCC [ENA] ¢þ
>WENV181416531 OGCL01097868 [OGCL] hot springs metagenome; Hot spring water 73 1 - Gly TCC [ENA] ¢þ
>WENV183514343 OMKS01016810 [OMKS] sediment metagenome; hot spring sediment 3055 2981 - Gly TCC [ENA] ¢þ
>WENV183664873 ORJL010418388 [ORJL] groundwater metagenome; groundwater 1297 1223 - Gly TCC [ENA] ¢þ
>WENV183666437 ORJL010551316 [ORJL] groundwater metagenome; groundwater 701 627 - Gly TCC [ENA] ¢þ
>WENV183667955 ORJL010699230 [ORJL] groundwater metagenome; groundwater 541 615 + Gly TCC [ENA] ¢þ
>WENV183672084 ORJL011134212 [ORJL] groundwater metagenome; groundwater 1174 1248 + Gly TCC [ENA] ¢þ
>WENV183674804 ORJL011432857 [ORJL] groundwater metagenome; groundwater 17880 17806 - Gly TCC [ENA] ¢þ
>WENV183685819 ORMF010906421 [ORMF] groundwater metagenome; groundwater 93 19 - Gly TCC [ENA] ¢þ
>WENV183702177 PDVH01021530 [PDVH] alkali sediment metagenome; glacial lake sediment 986 912 - Gly TCC [ENA] ¢þ
>WENV170223735 CEQE01002295 [CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 739 813 + Gly TCC [ENA] ¢þ
>WENV170647993 JRER01002081 [JRER] marine sediment metagenome; clay from marine sediments 136 meters below sea floor depth collected from drilling site U1352C 226 300 + Gly TCC [ENA] ¢þ
>WENV170648391 JRHI01000274 [JRHI] sediment metagenome; sediment from deep within a dark volcanic ice cave with no known source of introduced 34337 34409 + Gly TCC [ENA] ¢þ
>C191146291 CP035758 Chloroflexota Ktedonosporobacter rubrisoli SCAWS-G2 [CP035758] 10547118 10547192 + Gly TCC - ¡û
>SRA1002384 SRR001323.21483 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 41 115 + Gly TCC [SRA]
>SRA1002449 SRR001324.10648 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 72 1 - Gly TCC [SRA]
Identical group No.432929 (9 seq.)
>WENV180037405 FVAA011007680 [FVAA] soil metagenome; Soil 22 94 + Gly TCC [ENA] ¢þ
>WENV170145614 CENY01354586 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 28893 28967 + Gly TCC [ENA] ¢þ
>WENV170171621 CEOQ01066575 [CEOQ] marine metagenome genome assembly TARA_034_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 29855 29929 + Gly TCC [ENA] ¢þ
>WENV170425406 CEUP01096255 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 244 170 - Gly TCC [ENA] ¢þ
>WENV170444995 CEUY01014653 [CEUY] marine metagenome genome assembly TARA_123_MIX_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 13981 14055 + Gly TCC [ENA] ¢þ
>WENV170461752 CEVD01019196 [CEVD] marine metagenome genome assembly TARA_123_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 47699 47625 - Gly TCC [ENA] ¢þ
>WENV170492497 CEVQ01139718 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1308 1234 - Gly TCC [ENA] ¢þ
>WENV170910656 MDTE01095034 [MDTE] marine metagenome; seawater 93616 93690 + Gly TCC [ENA] ¢þ
>SRA1002347 SRR001322.46947 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 86 15 - Gly TCC [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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