tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = TGC

HIT: 5 Group(s).
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.250633 (2 seq.)
>SRA1002550 SRR001326.56401 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 98 21 - Ala TGC [SRA]
>W1610629279 LIHK01000014 unclassified Archaea Candidatus Bathyarchaeota archaeon BA2 [LIHK] 61900 61825 - Ala TGC [ENA]
Identical group No.250634 (2 seq.)
>SRA1002339 SRR001322.22339 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 76 1 - Ala TGC [SRA]
>SRA1002551 SRR001326.58920 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 91 14 - Ala TGC [SRA]
Identical group No.478007 (4 seq.)
>WENV170018235 BARV01029118 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 412 337 - Ala TGC [ENA]
>WENV170209783 CEPV01085588 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 768 843 + Ala TGC [ENA]
>SRA1002404 SRR001323.59359 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 93 + Ala TGC [SRA]
>SRA1002480 SRR001324.71539 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 75 1 - Ala TGC [SRA]
Identical group No.554066 (3 seq.)
>W09109897 ABUQ01000006 Chloroflexi Sphaerobacter thermophilus DSM 20745 [ABUQ] 26760 26835 + Ala TGC [ENA]
>SRA1002363 SRR001322.72719 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 92 18 - Ala TGC [SRA]
>C10112704 CP001823 Chloroflexi Sphaerobacter thermophilus DSM 20745 581404 581479 + Ala TGC [Ensembl]
Identical group No.628924 (2 seq.)
>W1711584124 MNYD01000090 Chloroflexi Dehalococcoidia bacterium CG2_30_46_19 (MNYD) 2778 2705 - Ala TGC [ENA]
>SRA1002386 SRR001323.31007 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 16 89 + Ala TGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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