tRNA genes clustered and arranged according to each identical group

Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)

Anticodon = TGC

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.250633 (2 seq.)
>SRA1002550 SRR001326.56401 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 98 21 - Ala TGC [SRA]
>W1610629279 LIHK01000014 Unclassified Candidatus Bathyarchaeota archaeon BA2 [LIHK] 61900 61825 - Ala TGC [ENA] ¡û
Identical group No.478007 (4 seq.)
>WENV170018235 BARV01029118 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 412 337 - Ala TGC [ENA] ¢þ
>WENV170209783 CEPV01085588 [CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 768 843 + Ala TGC [ENA] ¢þ
>SRA1002404 SRR001323.59359 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 19 93 + Ala TGC [SRA]
>SRA1002480 SRR001324.71539 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 75 1 - Ala TGC [SRA]
Identical group No.554066 (3 seq.)
>W09109897 ABUQ01000006 Thermomicrobiota Sphaerobacter thermophilus DSM 20745 [ABUQ] 26760 26835 + Ala TGC [ENA] ¡û
>SRA1002363 SRR001322.72719 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 92 18 - Ala TGC [SRA]
>C10112704 CP001823 Thermomicrobiota Sphaerobacter thermophilus DSM 20745 [CP001823, CP001824] 581404 581479 + Ala TGC [Ensembl] ¡û
Identical group No.628924 (2 seq.)
>W1711584124 MNYD01000090 Chloroflexota Dehalococcoidia bacterium CG2_30_46_19 [MNYD] 2778 2705 - Ala TGC [ENA] ¡û
>SRA1002386 SRR001323.31007 Metagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183) 16 89 + Ala TGC [SRA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK