tRNA genes clustered and arranged according to each identical group

Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)

Anticodon = AGA

HIT: 2 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.121041 (47 seq.)
>WENV180109914 OAPL01008845 [OAPL] marine metagenome; ENVO:00002010 for 'seawater 159 78 - Ser AGA [ENA] ¢þ
>WENV180214526 OBAP01007328 [OBAP] marine metagenome; ENVO:00002010 for 'seawater 488 404 - Ser AGA [ENA] ¢þ
>WENV180359459 OBNR01101374 [OBNR] marine metagenome; Seawater_00002010_00002149 88 169 + Ser AGA [ENA] ¢þ
>WENV180383258 OBOU01017642 [OBOU] marine metagenome; ENV:00002010 508 427 - Ser AGA [ENA] ¢þ
>WENV180387475 OBPF01001589 [OBPF] marine metagenome; Sterile flask 1153 1072 - Ser AGA [ENA] ¢þ
>WENV180397636 OBPY01052534 [OBPY] marine metagenome; Mesotrophic water 301 218 - Ser AGA [ENA] ¢þ
>WENV180638884 OCRI01038830 [OCRI] marine metagenome; Sterile flask 225 144 - Ser AGA [ENA] ¢þ
>WENV181306671 OFIM01000391 [OFIM] marine metagenome; seawater 2107 2188 + Ser AGA [ENA] ¢þ
>WENV181321959 OFKO01001856 [OFKO] marine metagenome; seawater 530 611 + Ser AGA [ENA] ¢þ
>WENV181325005 OFLI01001469 [OFLI] seawater metagenome; seawater 1373 1292 - Ser AGA [ENA] ¢þ
>WENV181385722 OFRJ01013059 [OFRJ] marine metagenome; seawater 417 498 + Ser AGA [ENA] ¢þ
>WENV182551330 OJCC01001529 [OJCC] seawater metagenome; Sea water 504 587 + Ser AGA [ENA] ¢þ
>WENV183618450 OOFO01001446 [OOFO] marine metagenome; seawater 1373 1292 - Ser AGA [ENA] ¢þ
>WENV183622475 OOFV01058412 [OOFV] marine metagenome; seawater 365 284 - Ser TGA [ENA] ¢þ
>WENV170289653 CERX01226511 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 622 + Ser AGA [ENA] ¢þ
>WENV170326758 CESU01018504 [CESU] marine metagenome genome assembly TARA_082_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 281 362 + Ser AGA [ENA] ¢þ
>WENV170569725 FLMP01281130 [FLMP] seawater metagenome; seawater 259 178 - Ser AGA [ENA] ¢þ
>WENV170598933 FUWD010055491 [FUWD] metagenome; unknown 631 550 - Ser AGA [ENA] ¢þ
>WENV170617000 FUWD012911672 [FUWD] metagenome; unknown 286 205 - Ser AGA [ENA] ¢þ
>WENV170617036 FUWD012911683 [FUWD] metagenome; unknown 2229 2148 - Ser AGA [ENA] ¢þ
>WENV170617183 FUWD012916745 [FUWD] metagenome; unknown 332 413 + Ser AGA [ENA] ¢þ
>WENV170621171 FUWD013051021 [FUWD] metagenome; unknown 606 687 + Ser AGA [ENA] ¢þ
>WENV170624928 FUWD013188963 [FUWD] metagenome; unknown 10 91 + Ser AGA [ENA] ¢þ
>WENV170629338 FUWD013267606 [FUWD] metagenome; unknown 606 687 + Ser AGA [ENA] ¢þ
>WENV170633185 FUWD013392641 [FUWD] metagenome; unknown 10 91 + Ser AGA [ENA] ¢þ
>SRA1007777 SRR020490.57586 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 162 81 - Ser AGA [SRA]
>SRA1008228 SRR020490.268346 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 161 80 - Ser AGA [SRA]
>SRA1008246 SRR020490.278682 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 161 80 - Ser AGA [SRA]
>SRA1026846 SRR035086.8212 454 Sequencing (SRP001807) 18 99 + Ser AGA [SRA]
>SRA1027039 SRR035086.50188 454 Sequencing (SRP001807) 166 247 + Ser AGA [SRA]
>SRA1027191 SRR035086.77791 454 Sequencing (SRP001807) 508 427 - Ser AGA [SRA]
>SRA1027358 SRR035086.111958 454 Sequencing (SRP001807) 194 113 - Ser AGA [SRA]
>SRA1027389 SRR035086.116386 454 Sequencing (SRP001807) 182 101 - Ser AGA [SRA]
>SRA1027420 SRR035086.121957 454 Sequencing (SRP001807) 349 430 + Ser AGA [SRA]
>SRA1027542 SRR035086.144822 454 Sequencing (SRP001807) 257 176 - Ser AGA [SRA]
>SRA1027553 SRR035086.146246 454 Sequencing (SRP001807) 368 287 - Ser AGA [SRA]
>SRA1027574 SRR035086.150744 454 Sequencing (SRP001807) 381 462 + Ser AGA [SRA]
>SRA1027625 SRR035086.162679 454 Sequencing (SRP001807) 124 205 + Ser AGA [SRA]
>SRA1027642 SRR035086.165775 454 Sequencing (SRP001807) 161 80 - Ser AGA [SRA]
>SRA1027669 SRR035086.169379 454 Sequencing (SRP001807) 258 177 - Ser AGA [SRA]
>SRA1027807 SRR035086.197329 454 Sequencing (SRP001807) 105 24 - Ser AGA [SRA]
>SRA1027883 SRR035086.212173 454 Sequencing (SRP001807) 84 165 + Ser AGA [SRA]
>SRA1027999 SRR035086.234774 454 Sequencing (SRP001807) 324 243 - Ser AGA [SRA]
>SRA1028520 SRR035086.346156 454 Sequencing (SRP001807) 261 342 + Ser AGA [SRA]
>SRA1028526 SRR035086.347790 454 Sequencing (SRP001807) 326 245 - Ser AGA [SRA]
>SRA1028589 SRR035086.367346 454 Sequencing (SRP001807) 166 247 + Ser AGA [SRA]
>SRA1028609 SRR035086.374247 454 Sequencing (SRP001807) 194 275 + Ser AGA [SRA]
Identical group No.121050 (11 seq.)
>WENV180045997 MPLT02039770 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 2399 2316 - Ser AGA [ENA] ¢þ
>WENV180049390 MPLU02056709 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 90 173 + Ser AGA [ENA] ¢þ
>WENV180051924 MPLU02253811 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 2119 2036 - Ser AGA [ENA] ¢þ
>WENV180053179 MPLU02352856 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 311 395 + Ser AGA [ENA] ¢þ
>WENV181391495 OFRT01013919 [OFRT] seawater metagenome; seawater 372 455 + Ser AGA [ENA] ¢þ
>WENV183618977 OOFP01010830 [OOFP] marine metagenome; seawater 372 455 + Ser AGA [ENA] ¢þ
>WENV183799091 PVBE010475337 [PVBE] marine metagenome; water 792 709 - Ser AGA [ENA] ¢þ
>WENV183806589 PVBE011130603 [PVBE] marine metagenome; water 161 244 + Ser AGA [ENA] ¢þ
>WENV183811578 PVBE011595411 [PVBE] marine metagenome; water 211 295 + Ser AGA [ENA] ¢þ
>WENV170424677 CEUP01003225 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 379 296 - Ser AGA [ENA] ¢þ
>SRA1012574 SRR020493.356826 Microbial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041) 227 144 - Ser AGA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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