tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = CGC

HIT: 10 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.244865 (1 seq.)
>A171006843 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 1315042 1314968 - Ala CGC -
Identical group No.261125 (1 seq.)
>A171006389 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 2884340 2884415 + Ala CGC -
Identical group No.494107 (5 seq.)
>A171001914 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 1067939 1067866 - Ala CGC -
>A171004252 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 1248064 1248136 + Ala CGC -
>A171004324 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 156878 156950 + Ala CGC -
>WENV180690237 OCZS010001020 [OCZS] soil metagenome; soil 1074 1002 - Ala CGC [ENA]
>WENV181164302 OEIR01104958 [OEIR] soil metagenome; soil 226 299 + Ala CGC [ENA]
Identical group No.594132 (1 seq.)
>A171007489 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 179766 179691 - Ala CGC -
Identical group No.661700 (21 seq.)
>A171007059 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1190090 1190161 + Ala CGC -
>WENV180115518 OAPT01005268 [OAPT] marine metagenome; seawater 474 403 - Ala CGC [ENA]
>WENV180360416 OBNT01088723 [OBNT] marine metagenome; Sea Water 117 46 - Ala CGC [ENA]
>WENV181092420 OEBK01000538 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1435 1506 + Ala CGC [ENA]
>WENV170112741 CENF01003664 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 787 858 + Ala CGC [ENA]
>WENV170122499 CENN01081146 [CENN] marine metagenome genome assembly TARA_023_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 456 385 - Ala CGC [ENA]
>WENV170145231 CENY01289706 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 205 276 + Ala CGC [ENA]
>WENV170148249 CENZ01283042 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 63 134 + Ala CGC [ENA]
>WENV170155133 CEOF01438258 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 600 671 + Ala CGC [ENA]
>WENV170241461 CEQN01295769 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 581 510 - Ala CGC [ENA]
>WENV170271854 CERK01013482 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 299 370 + Ala CGC [ENA]
>WENV170282591 CERS01200430 [CERS] marine metagenome genome assembly TARA_068_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 232 161 - Ala CGC [ENA]
>WENV170285663 CERW01008581 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 345 274 - Ala CGC [ENA]
>WENV170287456 CERX01019764 [CERX] marine metagenome genome assembly TARA_068_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 132 203 + Ala CGC [ENA]
>WENV170325139 CESS01200059 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1960 1889 - Ala CGC [ENA]
>WENV170475219 CEVH01286680 [CEVH] marine metagenome genome assembly TARA_141_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 619 548 - Ala CGC [ENA]
>WENV170504723 CEVV01375822 [CEVV] marine metagenome genome assembly TARA_152_MIX_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1673 1602 - Ala CGC [ENA]
>WENV170506077 CEVW01131380 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 9 80 + Ala CGC [ENA]
>WENV170508953 CEVX01313438 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 420 349 - Ala CGC [ENA]
>WENV170617137 FUWD012915098 [FUWD] metagenome; unknown 2 73 + Ala CGC [ENA]
>WENV170750130 LUMG01000392 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 1987 1916 - Ala CGC [ENA]
Identical group No.669636 (18 seq.)
>A171004106 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 1016551 1016622 + Ala CGC -
>WENV170147254 CENZ01125944 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 514 585 + Ala CGC [ENA]
>WENV170154275 CEOF01189434 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 697 626 - Ala CGC [ENA]
>WENV170247005 CEQQ01009924 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 403 474 + Ala CGC [ENA]
>WENV170256137 CEQX01053842 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 544 615 + Ala CGC [ENA]
>WENV170259976 CEQY01339496 [CEQY] marine metagenome genome assembly TARA_070_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 272 - Ala CGC [ENA]
>WENV170260975 CERB01029595 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 91 20 - Ala CGC [ENA]
>WENV170272492 CERK01115361 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 272 - Ala CGC [ENA]
>WENV170280511 CERR01141404 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 272 - Ala CGC [ENA]
>WENV170284793 CERV01087004 [CERV] marine metagenome genome assembly TARA_068_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 537 466 - Ala CGC [ENA]
>WENV170287034 CERW01241434 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 272 - Ala CGC [ENA]
>WENV170323857 CESS01031251 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 410 481 + Ala CGC [ENA]
>WENV170498031 CEVS01393456 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2008 1937 - Ala CGC [ENA]
>WENV170516468 CEWB01123202 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 343 272 - Ala CGC [ENA]
>WENV170730137 LULG01015213 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 753 682 - Ala CGC [ENA]
>WENV170761040 LUMU01005259 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 1650 1579 - Ala CGC [ENA]
>WENV170761597 LUMV01002462 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 257 328 + Ala CGC [ENA]
>W1910647528 LXWN01000001 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 672958 673029 + Ala CGC [ENA]
Identical group No.673078 (16 seq.)
>A171000230 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 188725 188797 + Ala CGC -
>A171003388 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 156179 156251 + Ala CGC -
>A171005910 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 501747 501819 + Ala CGC -
>WENV170537977 CEWR01042564 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 187 259 + Ala CGC [ENA]
>WENV170701498 LKGT01009822 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 4658 4586 - Ala CGC [ENA]
>WENV170701673 LKGT01012564 [LKGT] marine sediment metagenome; sediment sample collected at the water-sediment interface from the South Pacific gyre, IODP 1245 1173 - Ala CGC [ENA]
>W1910572976 JNVL01000054 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 2249 2321 + Ala CGC [ENA]
>W1910573204 JOSY01000006 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 11562 11634 + Ala CGC [ENA]
>W1910573241 JOSZ01000026 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-P11 [JOSZ] 7040 7112 + Ala CGC [ENA]
>W1910573260 JOTA01000035 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 3511 3439 - Ala CGC [ENA]
>W1910573294 JOTD01000033 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 7447 7519 + Ala CGC [ENA]
>W1610000535 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1094601 1094673 + Ala CGC [ENA]
>W1610005403 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 143872 143944 + Ala CGC [ENA]
>W1610005428 AJVJ01000015 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 94578 94650 + Ala CGC [ENA]
>W1610029897 AXWL01000004 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 53758 53686 - Ala CGC [ENA]
>WENV068891 AACY023742828 Marine microbial communities from Global Ocean Sampling (GOS) 693 767 + Ala CGC [ENA]
Identical group No.720472 (3 seq.)
>A171006022 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1652602 1652676 + Ala CGC -
>W1910126243 BGKI01000012 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 15459 15533 + Ala CGC [ENA]
>W1610617249 LGTD01000387 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 1518 1444 - Ala CGC [ENA]
Identical group No.725567 (2 seq.)
>A171006062 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 296981 296909 - Ala CGC -
>WENV170566561 FKKE01049073 [FKKE] freshwater metagenome; freshwater 557 483 - Ala CGC [ENA]
Identical group No.739208 (6 seq.)
>At0075 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 21853 21779 - Ala CGC [Ensembl]
>ENV004143 DQ397542 Environmental sample from ENV division of INSDC 10864 10938 + Ala CGC [ENA]
>ENV004184 DQ397601 Environmental sample from ENV division of INSDC 21903 21977 + Ala CGC [ENA]
>ENV004197 DQ397630 Environmental sample from ENV division of INSDC 1152 1226 + Ala CGC [ENA]
>ENV004233 DQ397856 Environmental sample from ENV division of INSDC 26066 25992 - Ala CGC [ENA]
>ENV004247 DQ397872 Environmental sample from ENV division of INSDC 29397 29323 - Ala CGC [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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