tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = GTC

HIT: 3 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.241608 (89 seq.)
>A171004111 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 974824 974747 - Asp GTC - ¡û
>WENV015826 AACY020445227 Marine microbial communities from Global Ocean Sampling (GOS) 872 951 + Asp GTC [ENA]
>WENV180045033 MOXS02073077 [MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter 291 214 - Asp GTC [ENA] ¢þ
>WENV180046833 MPLT02141155 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 6929 7006 + Asp GTC [ENA] ¢þ
>WENV180047264 MPLT02201010 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 12447 12370 - Asp GTC [ENA] ¢þ
>WENV180050350 MPLU02131246 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 4898 4975 + Asp GTC [ENA] ¢þ
>WENV180053793 MPLV02043738 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 107 184 + Asp GTC [ENA] ¢þ
>WENV180053798 MPLV02044060 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 7227 7304 + Asp GTC [ENA] ¢þ
>WENV180059015 MPLX02085734 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 10144 10221 + Asp GTC [ENA] ¢þ
>WENV183795326 PVBE010163946 [PVBE] marine metagenome; water 1029 952 - Asp GTC [ENA] ¢þ
>WENV183795466 PVBE010172475 [PVBE] marine metagenome; water 769 692 - Asp GTC [ENA] ¢þ
>WENV170152926 CEOF01041589 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 439 516 + Asp GTC [ENA] ¢þ
>WENV170157047 CEOJ01030944 [CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 821 898 + Asp GTC [ENA] ¢þ
>WENV170168445 CEOP01090902 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 456 381 - Asp GTC [ENA] ¢þ
>WENV170196938 CEPK01083156 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1860 1783 - Asp GTC [ENA] ¢þ
>WENV170211049 CEPW01033694 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3774 3851 + Asp GTC [ENA] ¢þ
>WENV170236651 CEQM01002574 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 242 165 - Asp GTC [ENA] ¢þ
>WENV170247032 CEQQ01011437 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 785 708 - Asp GTC [ENA] ¢þ
>WENV170253509 CEQU01094452 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 757 834 + Asp GTC [ENA] ¢þ
>WENV170256270 CEQX01067245 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1929 1852 - Asp GTC [ENA] ¢þ
>WENV170271887 CERK01016592 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 976 899 - Asp GTC [ENA] ¢þ
>WENV170279760 CERR01051772 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 676 599 - Asp GTC [ENA] ¢þ
>WENV170285643 CERW01006485 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 713 636 - Asp GTC [ENA] ¢þ
>WENV020794 AACY020558638 Marine microbial communities from Global Ocean Sampling (GOS) 792 713 - Asp GTC [ENA]
>WENV170298961 CESG01003796 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2887 2810 - Asp GTC [ENA] ¢þ
>WENV170308289 CESL01016194 [CESL] marine metagenome genome assembly TARA_102_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8121 8044 - Asp GTC [ENA] ¢þ
>WENV170320500 CESQ01420378 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 846 923 + Asp GTC [ENA] ¢þ
>WENV170324447 CESS01083948 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 380 305 - Asp GTC [ENA] ¢þ
>WENV170337051 CETA01061798 [CETA] marine metagenome genome assembly TARA_109_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8123 8046 - Asp GTC [ENA] ¢þ
>WENV170374299 CETT01071589 [CETT] marine metagenome genome assembly TARA_110_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 140 217 + Asp GTC [ENA] ¢þ
>WENV170389656 CEUA01032942 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 821 746 - Asp GTC [ENA] ¢þ
>WENV170405308 CEUG01088807 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 315 238 - Asp GTC [ENA] ¢þ
>WENV020911 AACY020560582 Marine microbial communities from Global Ocean Sampling (GOS) 928 1007 + Asp GTC [ENA]
>WENV170408652 CEUI01051030 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1462 1385 - Asp GTC [ENA] ¢þ
>WENV170424960 CEUP01025444 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 277 200 - Asp GTC [ENA] ¢þ
>WENV170429785 CEUR01075693 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 927 850 - Asp GTC [ENA] ¢þ
>WENV170441130 CEUV01148971 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1977 1900 - Asp GTC [ENA] ¢þ
>WENV170444511 CEUX01121331 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 130 53 - Asp GTC [ENA] ¢þ
>WENV170450348 CEUZ01110217 [CEUZ] marine metagenome genome assembly TARA_125_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 301 378 + Asp GTC [ENA] ¢þ
>WENV170489147 CEVP01051355 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1341 1264 - Asp GTC [ENA] ¢þ
>WENV170490646 CEVQ01010437 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 102 179 + Asp GTC [ENA] ¢þ
>WENV170491056 CEVQ01034360 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 6115 6038 - Asp GTC [ENA] ¢þ
>WENV170493489 CEVR01006173 [CEVR] marine metagenome genome assembly TARA_148_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 383 306 - Asp GTC [ENA] ¢þ
>WENV170496862 CEVS01107498 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 290 213 - Asp GTC [ENA] ¢þ
>WENV170498977 CEVT01098119 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 850 773 - Asp GTC [ENA] ¢þ
>WENV170516255 CEWB01092786 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 242 165 - Asp GTC [ENA] ¢þ
>WENV170528228 CEWJ01026803 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10650 10573 - Asp GTC [ENA] ¢þ
>WENV170599929 FUWD010098644 [FUWD] metagenome; unknown 274 199 - Asp GTC [ENA] ¢þ
>WENV170618232 FUWD012958988 [FUWD] metagenome; unknown 622 545 - Asp GTC [ENA] ¢þ
>WENV170625329 FUWD013196075 [FUWD] metagenome; unknown 1026 949 - Asp GTC [ENA] ¢þ
>WENV170633568 FUWD013398776 [FUWD] metagenome; unknown 1026 949 - Asp GTC [ENA] ¢þ
>WENV170729688 LULG01000324 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 8853 8776 - Asp GTC [ENA] ¢þ
>WENV170729880 LULG01003116 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 15 92 + Asp GTC [ENA] ¢þ
>WENV170730056 LULG01009552 [LULG] marine metagenome; Red Sea water column Station 169 - depth 200m 967 1044 + Asp GTC [ENA] ¢þ
>WENV170730604 LULH01000532 [LULH] marine metagenome; Red Sea water column Station 169 - depth 100m 5312 5389 + Asp GTC [ENA] ¢þ
>WENV170736340 LULM01001185 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 4681 4604 - Asp GTC [ENA] ¢þ
>WENV170736758 LULM01027649 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 79 2 - Asp GTC [ENA] ¢þ
>WENV170736960 LULN01000257 [LULN] marine metagenome; Red Sea water column Station 149 - depth 100m 6122 6199 + Asp GTC [ENA] ¢þ
>WENV170741557 LULT01000094 [LULT] marine metagenome; Red Sea water column Station 108 - depth 100m 5660 5737 + Asp GTC [ENA] ¢þ
>WENV170745817 LULZ01000065 [LULZ] marine metagenome; Red Sea water column Station 91 - depth 100m 5505 5582 + Asp GTC [ENA] ¢þ
>WENV170747674 LUMD01000008 [LUMD] marine metagenome; Red Sea water column Station 34 - depth 258m 26951 26874 - Asp GTC [ENA] ¢þ
>WENV170748574 LUME01000011 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 26340 26263 - Asp GTC [ENA] ¢þ
>WENV170749234 LUME01019009 [LUME] marine metagenome; Red Sea water column Station 34 - depth 200m 106 183 + Asp GTC [ENA] ¢þ
>WENV170749515 LUMF01000543 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 3741 3664 - Asp GTC [ENA] ¢þ
>WENV170749622 LUMF01002727 [LUMF] marine metagenome; Red Sea water column Station 34 - depth 100m 1921 1844 - Asp GTC [ENA] ¢þ
>WENV170750083 LUMG01000159 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 6168 6245 + Asp GTC [ENA] ¢þ
>WENV170750132 LUMG01000407 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 1621 1698 + Asp GTC [ENA] ¢þ
>WENV170751023 LUMH01012063 [LUMH] marine metagenome; Red Sea water column Station 34 - depth 25m 340 263 - Asp GTC [ENA] ¢þ
>WENV170754142 LUML01000282 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 11023 10946 - Asp GTC [ENA] ¢þ
>WENV170754179 LUML01000654 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 5910 5987 + Asp GTC [ENA] ¢þ
>WENV170754262 LUML01001576 [LUML] marine metagenome; Red Sea water column Station 22 - depth 10m 169 246 + Asp GTC [ENA] ¢þ
>WENV170756674 LUMP01000476 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 6711 6788 + Asp GTC [ENA] ¢þ
>WENV170758935 LUMS01000385 [LUMS] marine metagenome; Red Sea water column Station 192 - depth 25m 9360 9283 - Asp GTC [ENA] ¢þ
>WENV170760867 LUMU01000742 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 2286 2209 - Asp GTC [ENA] ¢þ
>WENV170761247 LUMU01023949 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 15 92 + Asp GTC [ENA] ¢þ
>WENV170761441 LUMV01000385 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 6406 6483 + Asp GTC [ENA] ¢þ
>WENV170761465 LUMV01000467 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 9077 9000 - Asp GTC [ENA] ¢þ
>WENV170821296 MDSY01019693 [MDSY] marine metagenome; seawater 19 96 + Asp GTC [ENA] ¢þ
>WENV170821355 MDSY01020856 [MDSY] marine metagenome; seawater 19 96 + Asp GTC [ENA] ¢þ
>WENV170906898 MDTE01045227 [MDTE] marine metagenome; seawater 4058 3981 - Asp GTC [ENA] ¢þ
>W1910647531 LXWN01000001 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 631231 631154 - Asp GTC [ENA] ¡û
>WENV044789 AACY022453202 Marine microbial communities from Global Ocean Sampling (GOS) 735 656 - Asp GTC [ENA]
>WENV054063 AACY023136569 Marine microbial communities from Global Ocean Sampling (GOS) 451 530 + Asp GTC [ENA]
>W1610937662 LUOY01000294 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S19_B12N3 [LUOY] 5505 5582 + Asp GTC [ENA] ¡û
>W1610937671 LUOZ01000033 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S25_B3 [LUOZ] 5660 5737 + Asp GTC [ENA] ¡û
>W1610937709 LUPB01000005 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S31_B2 [LUPB] 6122 6199 + Asp GTC [ENA] ¡û
>W1610937736 LUPC01000003 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S32_B2 [LUPC] 4491 4568 + Asp GTC [ENA] ¡û
>W1610937750 LUPD01000004 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S37_B6 [LUPD] 5312 5389 + Asp GTC [ENA] ¡û
>W1610937773 LUPE01000005 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S43_B1 [LUPE] 4505 4582 + Asp GTC [ENA] ¡û
Identical group No.244292 (27 seq.)
>A175000006 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 232880 232957 + Asp GTC - ¡û
>A175000120 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 198339 198416 + Asp GTC - ¡û
>A175000121 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 205519 205596 + Asp GTC - ¡û
>A175000211 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 544373 544450 + Asp GTC - ¡û
>A175000214 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1599133 1599056 - Asp GTC - ¡û
>A175000280 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1151029 1150952 - Asp GTC - ¡û
>At0088 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1695909 1695832 - Asp GTC [Ensembl] ¡û
>W1930002152 BGKI01000002 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 233058 232981 - Asp GTC [ENA] ¡û
>W1930009768 JNVL01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 35991 35914 - Asp GTC [ENA] ¡û
>W1930009780 JOSY01000006 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 68285 68362 + Asp GTC [ENA] ¡û
>W1930009788 JOTA01000004 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 34716 34639 - Asp GTC [ENA] ¡û
>W1930009789 JOTB01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D07 [JOTB] 39104 39181 + Asp GTC [ENA] ¡û
>W1930009792 JOTC01000005 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-O18 [JOTC] 41194 41117 - Asp GTC [ENA] ¡û
>W1930009797 JOTD01000033 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 64231 64308 + Asp GTC [ENA] ¡û
>W1650000020 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1138755 1138832 + Asp GTC [ENA] ¡û
>W1650000072 AEXL02000138 Nitrososphaerota Candidatus Nitrosopumilus salaria salaria BD31 [AEXL] 33677 33754 + Asp GTC [ENA] ¡û
>W1650000141 AJVI01000006 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 166 243 + Asp GTC [ENA] ¡û
>W1650000142 AJVJ01000016 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 7001 7078 + Asp GTC [ENA] ¡û
>W1650000143 AJVJ01000037 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 107420 107497 + Asp GTC [ENA] ¡û
>W1650000743 ARWO01000001 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA007-O23 [ARWO] 91422 91345 - Asp GTC [ENA] ¡û
>W1650000744 ARWQ01000008 Nitrososphaerota Marine Group I thaumarchaeote SCGC AB-629-I23 [ARWQ] 35656 35733 + Asp GTC [ENA] ¡û
>W1650001490 AVSQ01000002 Nitrososphaerota Candidatus Nitrosotenuis chungbukensis MY2 [AVSQ] 72934 72859 - Asp GTC [ENA] ¡û
>W1650001592 AXWJ01000009 Euryarchaeota Euryarchaeota archaeum SCGC AAA287-E17 SCGC AAA287-E17 [AXWJ] 8922 8999 + Asp GTC [ENA] ¡û
>W1650012636 LFEY01000005 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 73270 73193 - Asp GTC [ENA] ¡û
>W1650013024 LGTD01000426 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 2187 2264 + Asp GTC [ENA] ¡û
>W1650031449 LQMW01000019 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 158902 158825 - Asp GTC [ENA] ¡û
>W1650034474 LUOX01000011 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S08_B1 [LUOX] 1589 1666 + Asp GTC [ENA] ¡û
Identical group No.252642 (2 seq.)
>A175000215 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 333263 333338 + Asp GTC - ¡û
>W1650012566 LDXL01000004 Nitrososphaerota Thaumarchaeota archaeon CSP1-1 [LDXL] 130433 130356 - Asp GTC [ENA] ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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