tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = TTG

HIT: 7 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462700 (44 seq.)
>A171003434 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 33919 33846 - Gln TTG - ¡û
>A171006024 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1768782 1768855 + Gln TTG - ¡û
>WENV181307141 OFIP01000660 [OFIP] marine metagenome; seawater 238 165 - Gln TTG [ENA] ¢þ
>WENV181309431 OFIV01015542 [OFIV] marine metagenome; seawater 151 78 - Gln TTG [ENA] ¢þ
>WENV181315737 OFJQ01004349 [OFJQ] marine metagenome; seawater 346 273 - Gln TTG [ENA] ¢þ
>WENV181317131 OFJX01002123 [OFJX] marine metagenome; seawater 393 320 - Gln TTG [ENA] ¢þ
>WENV181318623 OFKA01002593 [OFKA] marine metagenome; seawater 250 323 + Gln TTG [ENA] ¢þ
>WENV181320788 OFKI01023538 [OFKI] marine metagenome; seawater 257 184 - Gln TTG [ENA] ¢þ
>WENV181323419 OFKX01017878 [OFKX] marine metagenome; seawater 356 429 + Gln TTG [ENA] ¢þ
>WENV181391026 OFRQ01018169 [OFRQ] seawater metagenome; seawater 348 421 + Gln TTG [ENA] ¢þ
>WENV182560444 OJDU01001337 [OJDU] seawater metagenome; Sea water 4745 4818 + Gln TTG [ENA] ¢þ
>WENV183621894 OOFV01000485 [OOFV] marine metagenome; seawater 2491 2564 + Gln TTG [ENA] ¢þ
>WENV183626135 OOGH01018344 [OOGH] marine metagenome; seawater 348 421 + Gln TTG [ENA] ¢þ
>WENV183626647 OOGJ01003892 [OOGJ] marine metagenome; seawater 164 91 - Gln TTG [ENA] ¢þ
>WENV183630602 OOGS01058430 [OOGS] marine metagenome; seawater 272 345 + Gln TTG [ENA] ¢þ
>WENV170145269 CENY01300170 [CENY] marine metagenome genome assembly TARA_032_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 736 663 - Gln TTG [ENA] ¢þ
>WENV170231416 CEQH01156814 [CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 236 309 + Gln TTG [ENA] ¢þ
>WENV170286798 CERW01140264 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 660 587 - Gln TTG [ENA] ¢þ
>WENV170379594 CETV01140105 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 246 319 + Gln TTG [ENA] ¢þ
>WENV170569442 FLMP01205098 [FLMP] seawater metagenome; seawater 123 196 + Gln TTG [ENA] ¢þ
>WENV170572085 FLOH01000524 [FLOH] marine metagenome; water 26810 26737 - Gln TTG [ENA] ¢þ
>WENV170599588 FUWD010081098 [FUWD] metagenome; unknown 533 606 + Gln TTG [ENA] ¢þ
>WENV170616793 FUWD012903138 [FUWD] metagenome; unknown 374 447 + Gln TTG [ENA] ¢þ
>WENV170625489 FUWD013198592 [FUWD] metagenome; unknown 1352 1425 + Gln TTG [ENA] ¢þ
>WENV170627220 FUWD013232122 [FUWD] metagenome; unknown 1233 1306 + Gln TTG [ENA] ¢þ
>WENV170632957 FUWD013389235 [FUWD] metagenome; unknown 4149 4222 + Gln TTG [ENA] ¢þ
>WENV170633721 FUWD013401035 [FUWD] metagenome; unknown 1352 1425 + Gln TTG [ENA] ¢þ
>WENV170750113 LUMG01000295 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 4499 4572 + Gln TTG [ENA] ¢þ
>WENV170756575 LUMP01000151 [LUMP] marine metagenome; Red Sea water column Station 12 - depth 47m 4770 4697 - Gln TTG [ENA] ¢þ
>WENV170763449 LWDU01010183 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 1915 1842 - Gln TTG [ENA] ¢þ
>WENV170764650 LWDU01032888 [LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater 6289 6216 - Gln TTG [ENA] ¢þ
>WENV170914664 MDTE01151690 [MDTE] marine metagenome; seawater 901 974 + Gln TTG [ENA] ¢þ
>WENV170953735 MEHZ011661576 [MEHZ] marine metagenome; marine surface water 573 646 + Gln TTG [ENA] ¢þ
>W1910126245 BGKI01000012 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 147565 147639 + Gln TTG [ENA] ¡û
>WENV002485 AACY020069770 Marine microbial communities from Global Ocean Sampling (GOS) 1511 1586 + Gln TTG [ENA]
>ENV09004364 ADKQ01009306 Marine metagenome apWin_C1 227 154 - Gln TTG [ENA] ¡û
>ENV09004415 ADKQ01015042 Marine metagenome apWin_C1 403 330 - Gln TTG [ENA] ¡û
>WENV11101327 AGBE01001473 Marine metagenome, Gulf of Maine surface waters 465 538 + Gln TTG [ENA] ¡û
>WENV11101393 AGBE01002153 Marine metagenome, Gulf of Maine surface waters 9402 9475 + Gln TTG [ENA] ¡û
>WENV059534 AACY023368928 Marine microbial communities from Global Ocean Sampling (GOS) 125 50 - Gln TTG [ENA]
>W1610003098 AEXL02000101 Nitrososphaerota Candidatus Nitrosopumilus salaria salaria BD31 [AEXL] 11782 11707 - Gln TTG [ENA] ¡û
>W1610005459 AJVJ01000044 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 33859 33786 - Gln TTG [ENA] ¡û
>W1610617246 LGTD01000266 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 3351 3278 - Gln TTG [ENA] ¡û
>W1610625336 LIAL01000067 Nitrososphaerota Nitrosopumilus sp. BACL13 MAG-121220-bin23 [LIAL] 3257 3184 - Gln TTG [ENA] ¡û
Identical group No.462701 (45 seq.)
>A171007080 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 79081 79008 - Gln TTG - ¡û
>WENV016592 AACY020466128 Marine microbial communities from Global Ocean Sampling (GOS) 1875 1952 + Gln TTG [ENA]
>WENV180049312 MPLU02050693 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 524 597 + Gln TTG [ENA] ¢þ
>WENV180052235 MPLU02279179 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 168 95 - Gln TTG [ENA] ¢þ
>WENV180053795 MPLV02043765 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 578 651 + Gln TTG [ENA] ¢þ
>WENV180054890 MPLV02119818 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 1490 1563 + Gln TTG [ENA] ¢þ
>WENV180061217 MPLX02212351 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 428 501 + Gln TTG [ENA] ¢þ
>WENV180115532 OAPT01005940 [OAPT] marine metagenome; seawater 575 502 - Gln TTG [ENA] ¢þ
>WENV180650442 OCSY01029294 [OCSY] marine metagenome; 30 L Plastic container 348 421 + Gln TTG [ENA] ¢þ
>WENV181092381 OEBK01000070 [OEBK] marine metagenome; ENVO:00002010 for 'seawater 1259 1186 - Gln TTG [ENA] ¢þ
>WENV183808841 PVBE011332188 [PVBE] marine metagenome; water 1313 1386 + Gln TTG [ENA] ¢þ
>WENV170114686 CENF01213462 [CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 584 657 + Gln TTG [ENA] ¢þ
>WENV170146384 CENZ01049815 [CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 220 147 - Gln TTG [ENA] ¢þ
>WENV170152875 CEOF01037424 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 59 132 + Gln TTG [ENA] ¢þ
>WENV170226697 CEQF01007728 [CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 367 440 + Gln TTG [ENA] ¢þ
>WENV170271856 CERK01013787 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 818 891 + Gln TTG [ENA] ¢þ
>WENV170294813 CESC01166645 [CESC] marine metagenome genome assembly TARA_078_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1490 1563 + Gln TTG [ENA] ¢þ
>WENV170322124 CESR01113085 [CESR] marine metagenome genome assembly TARA_100_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 4727 4800 + Gln TTG [ENA] ¢þ
>WENV170378596 CETV01032973 [CETV] marine metagenome genome assembly TARA_133_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 340 267 - Gln TTG [ENA] ¢þ
>WENV170389115 CETZ01238122 [CETZ] marine metagenome genome assembly TARA_132_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 831 758 - Gln TTG [ENA] ¢þ
>WENV170476624 CEVI01139860 [CEVI] marine metagenome genome assembly TARA_142_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 353 426 + Gln TTG [ENA] ¢þ
>WENV170476951 CEVJ01010288 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 483 410 - Gln TTG [ENA] ¢þ
>WENV170478449 CEVK01050473 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 156 229 + Gln TTG [ENA] ¢þ
>WENV170480835 CEVL01141672 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 886 959 + Gln TTG [ENA] ¢þ
>WENV170488179 CEVO01124904 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3764 3691 - Gln TTG [ENA] ¢þ
>WENV170492505 CEVQ01139963 [CEVQ] marine metagenome genome assembly TARA_148b_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 401 474 + Gln TTG [ENA] ¢þ
>WENV170505433 CEVW01064284 [CEVW] marine metagenome genome assembly TARA_149_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2631 2558 - Gln TTG [ENA] ¢þ
>WENV170507560 CEVX01063700 [CEVX] marine metagenome genome assembly TARA_152_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1833 1906 + Gln TTG [ENA] ¢þ
>WENV170535723 CEWP01097282 [CEWP] marine metagenome genome assembly TARA_067_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 514 441 - Gln TTG [ENA] ¢þ
>WENV170599075 FUWD010061390 [FUWD] metagenome; unknown 121 194 + Gln TTG [ENA] ¢þ
>WENV170599367 FUWD010072524 [FUWD] metagenome; unknown 385 312 - Gln TTG [ENA] ¢þ
>WENV170616763 FUWD012902012 [FUWD] metagenome; unknown 855 782 - Gln TTG [ENA] ¢þ
>WENV170616764 FUWD012902013 [FUWD] metagenome; unknown 227 154 - Gln TTG [ENA] ¢þ
>WENV170616795 FUWD012903292 [FUWD] metagenome; unknown 302 229 - Gln TTG [ENA] ¢þ
>WENV170616847 FUWD012904619 [FUWD] metagenome; unknown 347 420 + Gln TTG [ENA] ¢þ
>WENV170616848 FUWD012904620 [FUWD] metagenome; unknown 311 384 + Gln TTG [ENA] ¢þ
>WENV170617360 FUWD012923457 [FUWD] metagenome; unknown 283 210 - Gln TTG [ENA] ¢þ
>WENV170944847 MDUO01007118 [MDUO] marine metagenome; 30 m water sample from station 6 747 820 + Gln TTG [ENA] ¢þ
>WENV11101374 AGBE01002061 Marine metagenome, Gulf of Maine surface waters 2012 2085 + Gln TTG [ENA] ¡û
>WENV044754 AACY022450317 Marine microbial communities from Global Ocean Sampling (GOS) 467 544 + Gln TTG [ENA]
>WENV046995 AACY022633087 Marine microbial communities from Global Ocean Sampling (GOS) 639 564 - Gln TTG [ENA]
>WENV055798 AACY023240338 Marine microbial communities from Global Ocean Sampling (GOS) 1174 1251 + Gln TTG [ENA]
>WENV056337 AACY023254302 Marine microbial communities from Global Ocean Sampling (GOS) 24 101 + Gln TTG [ENA]
>WENV056661 AACY023261833 Marine microbial communities from Global Ocean Sampling (GOS) 1158 1235 + Gln TTG [ENA]
>W1610855507 LQMW01000008 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 119530 119457 - Gln TTG [ENA] ¡û
Identical group No.476960 (10 seq.)
>A171006063 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 106991 106918 - Gln TTG - ¡û
>WENV180294599 OBIY01277422 [OBIY] beach sand metagenome; beach sand 129 56 - Gln TTG [ENA] ¢þ
>WENV180309870 OBJS01066546 [OBJS] beach sand metagenome; beach sand 327 254 - Gln TTG [ENA] ¢þ
>WENV181145192 OEHO01224992 [OEHO] metagenome; unknown 188 115 - Gln TTG [ENA] ¢þ
>WENV183725957 PJQF01048080 [PJQF] biofilm metagenome; biomolecule (vanillin) treated reverse osmosis membrane biofilm 308 381 + Gln TTG [ENA] ¢þ
>WENV020478 AACY020554461 Marine microbial communities from Global Ocean Sampling (GOS) 556 481 - Gln TTG [ENA]
>WENV170566071 FKKE01005736 [FKKE] freshwater metagenome; freshwater 5868 5941 + Gln TTG [ENA] ¢þ
>W1910402088 FUYK01000010 Nitrososphaerota Candidatus Nitrosotalea bavarica SbT1 [FUYK] 84965 85038 + Gln TTG [ENA] ¡û
>W1910794340 MRWN01000499 Nitrososphaerota Thaumarchaeota archaeon BIN5 [MRWN] 5185 5112 - Gln TTG [ENA] ¡û
>W1610027662 AVSQ01000003 Nitrososphaerota Candidatus Nitrosotenuis chungbukensis MY2 [AVSQ] 102151 102226 + Gln TTG [ENA] ¡û
Identical group No.485338 (13 seq.)
>A171000253 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 81511 81439 - Gln TTG - ¡û
>A171003409 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 46457 46384 - Gln TTG - ¡û
>A171005905 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 129092 129164 + Gln TTG - ¡û
>WENV180588247 OCOP01013506 [OCOP] marine metagenome; water 434 361 - Gln TTG [ENA] ¢þ
>W1910572967 JNVL01000016 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 9588 9516 - Gln TTG [ENA] ¡û
>W1910572979 JOKN01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-N04 [JOKN] 89223 89150 - Gln TTG [ENA] ¡û
>W1910573225 JOSY01000077 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 133760 133687 - Gln TTG [ENA] ¡û
>W1910573243 JOTA01000002 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 52729 52802 + Gln TTG [ENA] ¡û
>W1910573288 JOTD01000021 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 1912 1839 - Gln TTG [ENA] ¡û
>W1910573289 JOTD01000022 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 1959 1887 - Gln TTG [ENA] ¡û
>W1610000543 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 987387 987315 - Gln TTG [ENA] ¡û
>W1610005405 AJVI01000005 Nitrososphaerota Nitrosopumilus sp. SJ [AJVI] 33857 33784 - Gln TTG [ENA] ¡û
>W1610005425 AJVJ01000014 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 33860 33787 - Gln TTG [ENA] ¡û
Identical group No.583172 (5 seq.)
>A171007490 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 118566 118494 - Gln TTG - ¡û
>WENV180352960 OBLQ010462617 [OBLQ] soil metagenome; soil 178 251 + Gln TTG [ENA] ¢þ
>WENV017476 AACY020485236 Marine microbial communities from Global Ocean Sampling (GOS) 2313 2388 + Gln TTG [ENA]
>W1910285417 FRFC01000001 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 204662 204734 + Gln TTG [ENA] ¡û
>WENV048920 AACY022759516 Marine microbial communities from Global Ocean Sampling (GOS) 767 692 - Gln TTG [ENA]
Identical group No.726708 (6 seq.)
>A173000174 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 86458 86387 - Gln TTG - ¡û
>W1930011848 LXWN01000002 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 246641 246570 - Gln TTG [ENA] ¡û
>W1630018162 LUOZ01000048 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S25_B3 [LUOZ] 951 880 - Gln TTG [ENA] ¡û
>W1630018174 LUPB01000064 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S31_B2 [LUPB] 19115 19186 + Gln TTG [ENA] ¡û
>W1630018180 LUPD01000029 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S37_B6 [LUPD] 652 723 + Gln TTG [ENA] ¡û
>W1630018188 LUPE01000073 Nitrososphaerota Nitrosopelagicus sp. REDSEA-S43_B1 [LUPE] 359 288 - Gln TTG [ENA] ¡û
Identical group No.818409 (3 seq.)
>At0093 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1933052 1932982 - Gln TTG [Ensembl] ¡û
>ENV004144 DQ397544 Environmental sample from ENV division of INSDC 1420 1493 + Gln TTG [ENA]
>ENV004156 DQ397567 Environmental sample from ENV division of INSDC 676 603 - Gln TTG [ENA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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