tRNA genes clustered and arranged according to each identical group

Nitrososphaerota

Anticodon = TTT

HIT: 8 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.281131 (56 seq.)
>A171004104 CP007026 Nitrososphaerota Candidatus Nitrosopelagicus brevis CN25 [CP007026] 974922 974996 + Lys TTT - ¡û
>WENV015825 AACY020445227 Marine microbial communities from Global Ocean Sampling (GOS) 776 698 - Lys TTT [ENA]
>WENV180046834 MPLT02141155 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 6831 6757 - Lys TTT [ENA] ¢þ
>WENV180047263 MPLT02201010 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 12547 12621 + Lys TTT [ENA] ¢þ
>WENV180048475 MPLT02354702 [MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter 6827 6753 - Lys TTT [ENA] ¢þ
>WENV180050351 MPLU02131246 [MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter 4798 4724 - Lys TTT [ENA] ¢þ
>WENV180053799 MPLV02044060 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 7127 7053 - Lys TTT [ENA] ¢þ
>WENV180054177 MPLV02072774 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 598 524 - Lys TTT [ENA] ¢þ
>WENV180054178 MPLV02072913 [MPLV] marine metagenome; 100 m water sample filtered on 0.2 um supor filter 560 486 - Lys TTT [ENA] ¢þ
>WENV180059016 MPLX02085734 [MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter 10044 9970 - Lys TTT [ENA] ¢þ
>WENV180387156 OBPD01079889 [OBPD] marine metagenome; Sea Water 280 206 - Lys TTT [ENA] ¢þ
>WENV183795465 PVBE010172475 [PVBE] marine metagenome; water 869 943 + Lys TTT [ENA] ¢þ
>WENV170152927 CEOF01041589 [CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 341 267 - Lys TTT [ENA] ¢þ
>WENV170168444 CEOP01090902 [CEOP] marine metagenome genome assembly TARA_009_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 554 628 + Lys TTT [ENA] ¢þ
>WENV170189324 CEPB01180031 [CEPB] marine metagenome genome assembly TARA_057_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 94 168 + Lys TTT [ENA] ¢þ
>WENV170196937 CEPK01083156 [CEPK] marine metagenome genome assembly TARA_042_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1958 2032 + Lys TTT [ENA] ¢þ
>WENV170211050 CEPW01033694 [CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 3676 3602 - Lys TTT [ENA] ¢þ
>WENV170236650 CEQM01002574 [CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 340 414 + Lys TTT [ENA] ¢þ
>WENV170238916 CEQN01001315 [CEQN] marine metagenome genome assembly TARA_078_DCM_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 96 172 + Lys TTT [ENA] ¢þ
>WENV170247031 CEQQ01011437 [CEQQ] marine metagenome genome assembly TARA_076_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 883 957 + Lys TTT [ENA] ¢þ
>WENV170253510 CEQU01094452 [CEQU] marine metagenome genome assembly TARA_076_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 659 585 - Lys TTT [ENA] ¢þ
>WENV170256269 CEQX01067245 [CEQX] marine metagenome genome assembly TARA_070_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2027 2101 + Lys TTT [ENA] ¢þ
>WENV170261135 CERB01041658 [CERB] marine metagenome genome assembly TARA_072_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1060 986 - Lys TTT [ENA] ¢þ
>WENV170271886 CERK01016592 [CERK] marine metagenome genome assembly TARA_066_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1074 1148 + Lys TTT [ENA] ¢þ
>WENV170279759 CERR01051772 [CERR] marine metagenome genome assembly TARA_068_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 773 848 + Lys TTT [ENA] ¢þ
>WENV170285642 CERW01006485 [CERW] marine metagenome genome assembly TARA_066_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 811 885 + Lys TTT [ENA] ¢þ
>WENV170298960 CESG01003796 [CESG] marine metagenome genome assembly TARA_078_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2985 3059 + Lys TTT [ENA] ¢þ
>WENV170320501 CESQ01420378 [CESQ] marine metagenome genome assembly TARA_100_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 748 674 - Lys TTT [ENA] ¢þ
>WENV170324446 CESS01083948 [CESS] marine metagenome genome assembly TARA_023_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 478 552 + Lys TTT [ENA] ¢þ
>WENV170389655 CEUA01032942 [CEUA] marine metagenome genome assembly TARA_132_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 919 993 + Lys TTT [ENA] ¢þ
>WENV020910 AACY020560582 Marine microbial communities from Global Ocean Sampling (GOS) 832 754 - Lys TTT [ENA]
>WENV170405307 CEUG01088807 [CEUG] marine metagenome genome assembly TARA_128_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 413 487 + Lys TTT [ENA] ¢þ
>WENV170408651 CEUI01051030 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1559 1636 + Lys TTT [ENA] ¢þ
>WENV170424959 CEUP01025444 [CEUP] marine metagenome genome assembly TARA_123_MIX_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 375 449 + Lys TTT [ENA] ¢þ
>WENV170429784 CEUR01075693 [CEUR] marine metagenome genome assembly TARA_123_SRF_0.22-0.45 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1025 1099 + Lys TTT [ENA] ¢þ
>WENV170441129 CEUV01148971 [CEUV] marine metagenome genome assembly TARA_123_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2075 2149 + Lys TTT [ENA] ¢þ
>WENV170444510 CEUX01121331 [CEUX] marine metagenome genome assembly TARA_123_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 228 302 + Lys TTT [ENA] ¢þ
>WENV170478282 CEVK01032113 [CEVK] marine metagenome genome assembly TARA_149_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 119 193 + Lys TTT [ENA] ¢þ
>WENV170483008 CEVM01078582 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 143 217 + Lys TTT [ENA] ¢þ
>WENV170489146 CEVP01051355 [CEVP] marine metagenome genome assembly TARA_150_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 1439 1513 + Lys TTT [ENA] ¢þ
>WENV170496861 CEVS01107498 [CEVS] marine metagenome genome assembly TARA_151_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 388 462 + Lys TTT [ENA] ¢þ
>WENV170498976 CEVT01098119 [CEVT] marine metagenome genome assembly TARA_150_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 948 1022 + Lys TTT [ENA] ¢þ
>WENV170510722 CEVZ01023959 [CEVZ] marine metagenome genome assembly TARA_041_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2029 1955 - Lys TTT [ENA] ¢þ
>WENV170516254 CEWB01092786 [CEWB] marine metagenome genome assembly TARA_068_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 340 414 + Lys TTT [ENA] ¢þ
>WENV170528227 CEWJ01026803 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 10748 10822 + Lys TTT [ENA] ¢þ
>WENV170617653 FUWD012933770 [FUWD] metagenome; unknown 85 159 + Lys TTT [ENA] ¢þ
>WENV170625328 FUWD013196075 [FUWD] metagenome; unknown 1125 1199 + Lys TTT [ENA] ¢þ
>WENV170633567 FUWD013398776 [FUWD] metagenome; unknown 1125 1199 + Lys TTT [ENA] ¢þ
>WENV170736757 LULM01027649 [LULM] marine metagenome; Red Sea water column Station 149 - depth 200m 177 251 + Lys TTT [ENA] ¢þ
>WENV170750084 LUMG01000159 [LUMG] marine metagenome; Red Sea water column Station 34 - depth 50m 6070 5996 - Lys TTT [ENA] ¢þ
>WENV170761145 LUMU01013004 [LUMU] marine metagenome; Red Sea water column Station 192 - depth 100m 1510 1436 - Lys TTT [ENA] ¢þ
>WENV170761464 LUMV01000467 [LUMV] marine metagenome; Red Sea water column Station 192 - depth 200m 9143 9217 + Lys TTT [ENA] ¢þ
>WENV170793580 MDSV01118700 [MDSV] marine metagenome; seawater 6 82 + Lys TTT [ENA] ¢þ
>WENV170807190 MDSW01094413 [MDSW] marine metagenome; seawater 5841 5767 - Lys TTT [ENA] ¢þ
>W1910647526 LXWN01000001 Nitrososphaerota Candidatus Nitrosopelagicus brevis brevis U25 [LXWN] 631329 631403 + Lys TTT [ENA] ¡û
>WENV11101315 AGBE01001005 Marine metagenome, Gulf of Maine surface waters 1159 1085 - Lys TTT [ENA] ¡û
Identical group No.301931 (2 seq.)
>A178000652 CP012850 Nitrososphaerota Candidatus Nitrosocosmicus oleophilus MY3 [CP012850] 339165 339073 - Lys TTT - ¡û
>A178000689 CP017922 Nitrososphaerota Candidatus Nitrosocosmicus hydrocola G61 [CP017922] 514164 514255 + Lys TTT - ¡û
Identical group No.320575 (12 seq.)
>A173000270 CP011097 Nitrososphaerota Candidatus Nitrosotenuis cloacae SAT1 [CP011097] 333165 333089 - Lys TTT - ¡û
>A173000360 LN890280 Nitrososphaerota Candidatus Nitrosotalea devanaterra [LN890280] 1576269 1576343 + Lys TTT - ¡û
>W1930005183 FRFC01000003 Nitrososphaerota Candidatus Nitrosotalea sinensis Nd2 [FRFC] 300023 299948 - Lys TTT [ENA] ¡û
>W1930007275 FUYK01000010 Nitrososphaerota Candidatus Nitrosotalea bavarica SbT1 [FUYK] 11044 11118 + Lys TTT [ENA] ¡û
>W1930018038 MNED01000023 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_38_12 [MNED] 81 7 - Lys TTT [ENA] ¡û
>W1930018054 MNFB01000008 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_4_38_7 [MNFB] 2121 2047 - Lys TTT [ENA] ¡û
>W1930018082 MNGY01000100 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_2 [MNGY] 5243 5169 - Lys TTT [ENA] ¡û
>W1930018084 MNGZ01000016 Nitrososphaerota Thaumarchaeota archaeon 13_1_40CM_2_39_13_1 [MNGZ] 532 458 - Lys TTT [ENA] ¡û
>W1930018102 MNJT01000015 Nitrososphaerota Thaumarchaeota archaeon 13_1_20CM_2_39_11 [MNJT] 414 340 - Lys TTT [ENA] ¡û
>W1930018861 MRWN01000041 Nitrososphaerota Thaumarchaeota archaeon BIN5 [MRWN] 533 458 - Lys TTT [ENA] ¡û
>W1630000938 AVSQ01000002 Nitrososphaerota Candidatus Nitrosotenuis chungbukensis MY2 [AVSQ] 73030 73104 + Lys TTT [ENA] ¡û
>W1630003651 CBTY010000009 Nitrososphaerota Candidatus Nitrosotenuis uzonensis N4 [CBTY] 354533 354609 + Lys TTT [ENA] ¡û
Identical group No.320928 (16 seq.)
>A173000009 CP000866 Nitrososphaerota Nitrosopumilus maritimus SCM1 [CP000866] 232783 232709 - Lys TTT - ¡û
>A173000117 CP003842 Nitrososphaerota Candidatus Nitrosopumilus koreensis AR1 [CP003842] 198242 198168 - Lys TTT - ¡û
>A173000126 CP003843 Nitrososphaerota Candidatus Nitrosopumilus sediminis AR2 [CP003843] 205422 205348 - Lys TTT - ¡û
>A173000255 CP010868 Nitrososphaerota Nitrosopumilus piranensis D3C [CP010868] 544276 544202 - Lys TTT - ¡û
>A173000260 CP011070 Nitrososphaerota Nitrosopumilus adriaticus NF5 [CP011070] 1599230 1599304 + Lys TTT - ¡û
>W1930002151 BGKI01000002 Nitrososphaerota Nitrosopumilus zosterae sp. NM25 [BGKI] 233155 233229 + Lys TTT [ENA] ¡û
>W1930009767 JNVL01000001 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-E16 [JNVL] 36088 36162 + Lys TTT [ENA] ¡û
>W1930009781 JOSY01000006 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-D11 [JOSY] 68188 68114 - Lys TTT [ENA] ¡û
>W1930009787 JOTA01000004 Nitrososphaerota Marine Group I thaumarchaeote SCGC AAA799-B03 [JOTA] 34813 34887 + Lys TTT [ENA] ¡û
>W1930009798 JOTD01000033 Nitrososphaerota Marine Group I thaumarchaeote SCGC RSA3 [JOTD] 64134 64060 - Lys TTT [ENA] ¡û
>W1630000061 ABEO01000001 Nitrososphaerota Nitrosopumilus maritimus maritimus SCM1 [ABEO] 1138658 1138582 - Lys TTT [ENA] ¡û
>W1630000196 AEXL02000138 Nitrososphaerota Candidatus Nitrosopumilus salaria salaria BD31 [AEXL] 33580 33504 - Lys TTT [ENA] ¡û
>W1630000376 AJVJ01000016 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 6904 6828 - Lys TTT [ENA] ¡û
>W1630000378 AJVJ01000037 Nitrososphaerota Nitrosopumilus sp. AR [AJVJ] 107323 107249 - Lys TTT [ENA] ¡û
>W1630010756 LGTD01000426 Nitrososphaerota Candidatus Nitrosopumilus sp. DDS1 [LGTD] 2090 2014 - Lys TTT [ENA] ¡û
>W1630016212 LQMW01000019 Nitrososphaerota Nitrosopumilus sp. Nsub [LQMW] 158998 159074 + Lys TTT [ENA] ¡û
Identical group No.360685 (5 seq.)
>A173000340 CP021324 Nitrososphaerota Candidatus Nitrosomarinus catalina SPOT01 [CP021324] 1151126 1151200 + Lys TTT - ¡û
>W1630001044 AXWL01000004 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 29989 30063 + Lys TTT [ENA] ¡û
>W1630001047 AXWL01000007 Nitrososphaerota Thaumarchaeota archaeon SCGC AAA282-K18 [AXWL] 7226 7150 - Lys TTT [ENA] ¡û
>W1630009349 JPUE01000084 Nitrososphaerota Nitrosopumilus sp. PRT-SC01 [JPUE] 15070 15143 + Lys TTT [ENA] ¡û
>W1630010232 LFEY01000005 Nitrososphaerota Thaumarchaeota archaeon casp-thauma3 [LFEY] 73367 73443 + Lys TTT [ENA] ¡û
Identical group No.391915 (2 seq.)
>A178000420 CP007174 Nitrososphaerota Candidatus Nitrososphaera evergladensis SR1 [CP007174] 1001107 1001014 - Lys TTT - ¡û
>A179000498 CP007536 Nitrososphaerota Nitrososphaera viennensis EN76 [CP007536] 2439199 2439106 - Lys TTT - ¡û
Identical group No.398593 (4 seq.)
>At0069 DP000238 Nitrososphaerota Cenarchaeum symbiosum [DP000238] 1696052 1696125 + Lys TTT [Ensembl] ¡û
>ENV004202 DQ397638 Environmental sample from ENV division of INSDC 22372 22296 - Lys TTT [ENA]
>ENV004237 DQ397860 Environmental sample from ENV division of INSDC 36090 36166 + Lys TTT [ENA]
>ENV004242 DQ397865 Environmental sample from ENV division of INSDC 33766 33690 - Lys TTT [ENA]
Identical group No.415943 (1 seq.)
>A178000185 CP002408 Nitrososphaerota Candidatus Nitrososphaera gargensis Ga9.2 [CP002408] 2182666 2182576 - Lys TTT - ¡û
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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