tRNA genes clustered and arranged according to each identical group

Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138)

Anticodon = TCC

HIT: 2 Group(s).
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.779698 (1 seq.)
>SRA1000747 SRR001046.251642 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 81 8 - Gly TCC [SRA]
Identical group No.779699 (29 seq.)
>W1711456272 MJAP01000001 Alphaproteobacteria Natronohydrobacter thiooxidans [MJAP] 184337 184264 - Gly TCC [ENA] ¡û
>w014867 AAOT01000032 Alphaproteobacteria Oceanicola granulosus HTCC2516 [AAOT] 16380 16310 - Gly TCC [ENA] ¡û
>W141065736 AQQW01000003 Alphaproteobacteria Roseivivax marinus 22II-s10s [AQQW] 238327 238400 + Gly TCC [ENA] ¡û
>W141284625 JALZ01000015 Alphaproteobacteria Roseivivax halodurans JCM 10272 [JALZ] 53242 53169 - Gly TCC [ENA] ¡û
>W141284805 JAME01000005 Alphaproteobacteria Roseivivax isoporae LMG 25204 [JAME] 163097 163024 - Gly TCC [ENA] ¡û
>ENV08000766 ABMI01104414 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 78 5 - Gly TCC [ENA] ¡û
>ENV08000767 ABMI01105500 saltern metagenome; microbial fraction from low salinity saltern in San Diego, CA 79 6 - Gly TCC [ENA] ¡û
>ENV08002558 ABPX01004654 microbial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat 281 354 + Gly TCC [ENA] ¡û
>WENV170370338 CETR01090473 [CETR] marine metagenome genome assembly TARA_112_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 97 170 + Gly TCC [ENA] ¢þ
>WENV170477433 CEVJ01072928 [CEVJ] marine metagenome genome assembly TARA_146_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 497 570 + Gly TCC [ENA] ¢þ
>WENV170482668 CEVM01049870 [CEVM] marine metagenome genome assembly TARA_145_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 131 58 - Gly TCC [ENA] ¢þ
>WENV170488357 CEVO01187110 [CEVO] marine metagenome genome assembly TARA_152_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 499 572 + Gly TCC [ENA] ¢þ
>WENV170652863 JRYH01056522 [JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and 258 331 + Gly TCC [ENA] ¢þ
>WENV170682689 LFIK01000921 [LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5 7741 7668 - Gly TCC [ENA] ¢þ
>C181052349 CP021404 Alphaproteobacteria Pacificitalea manganoxidans DY25 [CP021404] 1226884 1226811 - Gly TCC - ¡û
>C191152265 CP036532 Alphaproteobacteria Roseitalea porphyridii MA7-20 [CP036532] 1660157 1660230 + Gly TCC - ¡û
>W1910549341 FZPF01000002 Alphaproteobacteria Jannaschia aquimarina DSM 28248 [FZPF] 50889 50816 - Gly TCC [ENA] ¡û
>W1911582608 PHNT01000001 Alphaproteobacteria Roseovarius salinarum N53 [PHNT] 528760 528833 + Gly TCC [ENA] ¡û
>SRA1000754 SRR001046.263361 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 78 5 - Gly TCC [SRA]
>SRA1000757 SRR001046.277613 Solar Salterns, microbial fraction from low salinity saltern in San Diego, CA (SRP000138) 79 6 - Gly TCC [SRA]
>W1810503941 QBKN01000002 Alphaproteobacteria Allosediminivita pacifica DSM 29329 [QBKN] 224008 223935 - Gly TCC [ENA] ¡û
>W1511524539 JYFE01000017 Alphaproteobacteria Jannaschia aquimarina GSW-M26 [JYFE] 137809 137882 + Gly TCC [ENA] ¡û
>WENV070000 AACY023792539 Marine microbial communities from Global Ocean Sampling (GOS) 119 194 + Gly TCC [ENA]
>W1710015388 AQQQ01000002 Alphaproteobacteria Roseovarius sp. 22II1-1F6A [AQQQ] 196030 196103 + Gly TCC [ENA] ¡û
>W1710530942 FNPF01000006 Alphaproteobacteria Citreimonas salinaria [FNPF] 108375 108448 + Gly TCC [ENA] ¡û
>W1710543818 FOAI01000002 Alphaproteobacteria Roseivivax marinus [FOAI] 143992 143919 - Gly TCC [ENA] ¡û
>W1710559561 FOMS01000018 Alphaproteobacteria Roseivivax sediminis [FOMS] 9739 9812 + Gly TCC [ENA] ¡û
>W1710573866 FOXV01000002 Alphaproteobacteria Roseivivax halotolerans [FOXV] 315354 315281 - Gly TCC [ENA] ¡û
>W1710591374 FRBR01000001 Alphaproteobacteria Roseovarius pacificus [FRBR] 1117036 1116963 - Gly TCC [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
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