tRNA genes clustered and arranged according to each identical group

Thermoproteota

Anticodon = CTC

HIT: 26 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.32 (1 seq.)
>A176000107 CP003531 Thermoproteota Thermogladius calderae 1633 [CP003531] 345431 345533 + Glu CTC -
Identical group No.234529 (1 seq.)
>A17A000090 CP001140 Thermoproteota Desulfurococcus amylolyticus 1221n [CP001140] 1066867 1066977 + Glu CTC -
Identical group No.234715 (1 seq.)
>A17A000939 CP003531 Thermoproteota Thermogladius calderae 1633 [CP003531] 345431 345534 + Glu CTC -
Identical group No.238848 (1 seq.)
>At0603 CP000505 Thermoproteota Thermofilum pendens Hrk 5 [CP000505] 709883 709759 - Glu CTC [Ensembl]
Identical group No.241179 (7 seq.)
>A171001683 CP002100 Thermoproteota Vulcanisaeta distributa DSM 14429 [CP002100] 53378 53455 + Glu CTC -
>W1910595853 JZWU01000045 Thermoproteota Vulcanisaeta sp. AZ3 [JZWU] 5421 5344 - Glu CTC [ENA]
>W1610024286 ATWG01000002 Thermoproteota Stygiolobus azoricus DSM 6296 [ATWG] 137404 137327 - Glu CTC [ENA]
>W1610047656 BBDM01000004 Thermoproteota Vulcanisaeta sp. JCM 14467 [BBDM] 151945 152022 + Glu CTC [ENA]
>W1610047690 BBDN01000013 Thermoproteota Vulcanisaeta sp. JCM 16159 [BBDN] 73274 73351 + Glu CTC [ENA]
>W1610047705 BBDO01000004 Thermoproteota Vulcanisaeta sp. JCM 16161 [BBDO] 177081 177158 + Glu CTC [ENA]
>W1610060752 BCLI01000004 Thermoproteota Vulcanisaeta thermophila CBA1501 [BCLI] 307541 307618 + Glu CTC [ENA]
Identical group No.241305 (4 seq.)
>A173000080 CP002817 Thermoproteota Sulfolobus acidocaldarius N8 [CP002817] 694096 694186 + Glu CTC -
>A173000081 CP002818 Thermoproteota Sulfolobus acidocaldarius Ron12/I [CP002818] 694100 694190 + Glu CTC -
>A173000168 CP006977 Thermoproteota Sulfolobus acidocaldarius SUSAZ [CP006977] 644174 644264 + Glu CTC -
>At0431 CP000077 Thermoproteota Sulfolobus acidocaldarius DSM 639 [CP000077] 694093 694183 + Glu CTC [Ensembl]
Identical group No.242119 (1 seq.)
>At0549 BA000023 Thermoproteota Sulfurisphaera tokodaii str. 7 [BA000023] 371173 371083 - Glu CTC [Ensembl]
Identical group No.242130 (4 seq.)
>A176000144 CP011055 Thermoproteota Saccharolobus solfataricus SARC-B [CP011055] 1678725 1678636 - Glu CTC -
>A176000147 CP011056 Thermoproteota Saccharolobus solfataricus SARC-C [CP011056] 1678726 1678637 - Glu CTC -
>A176000150 CP011057 Thermoproteota Saccharolobus solfataricus SULA [CP011057] 1678743 1678654 - Glu CTC -
>At0507 AE006641 Thermoproteota Saccharolobus solfataricus P2 [AE006641] 648313 648224 - Glu CTC [Ensembl]
Identical group No.242909 (6 seq.)
>A171003215 CP003423 Thermoproteota Fervidicoccus fontis Kam940 [CP003423] 567302 567227 - Glu CTC -
>A171006420 CP013011 Thermoproteota Pyrodictium delaneyi Su06 [CP013011] 473187 473264 + Glu CTC -
>WENV181229126 OFEJ01000533 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 3642 3719 + Glu CTC [ENA]
>At0141 CP000493 Thermoproteota Hyperthermus butylicus DSM 5456 [CP000493] 1600133 1600056 - Glu CTC [Ensembl]
>W1910870014 NCQP01000007 Thermoproteota Pyrodictium delaneyi Hulk [NCQP] 135427 135504 + Glu CTC [ENA]
>W1610772495 LNTB01000001 Thermoproteota Pyrodictium occultum PL-19 [LNTB] 425222 425299 + Glu CTC [ENA]
Identical group No.242935 (9 seq.)
>A178000210 CP002529 Thermoproteota Vulcanisaeta moutnovskia 768-28 [CP002529] 904837 904929 + Glu CTC -
>A177000019 CP002529 Thermoproteota Vulcanisaeta moutnovskia 768-28 [CP002529] 904837 904926 + Glu CTC -
>WENV181228721 OFEH01001655 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 372 449 + Glu CTC [ENA]
>WENV181229305 OFEJ01003840 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 1696 1619 - Glu CTC [ENA]
>WENV181406880 OGCG01002191 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 1280 1203 - Glu CTC [ENA]
>W1910599133 LCWN02000064 Thermoproteota Vulcanisaeta sp. EB80 [LCWN] 11598 11521 - Glu CTC [ENA]
>W1610781353 LOCE01000035 Thermoproteota Vulcanisaeta sp. JCHS_4 [LOCE] 68936 68859 - Glu CTC [ENA]
>W1610781363 LOCF01000021 Thermoproteota Vulcanisaeta sp. OSP_8 [LOCF] 6926 7003 + Glu CTC [ENA]
>W1610781384 LOCH01000134 Thermoproteota Vulcanisaeta sp. MG_3 [LOCH] 3183 3260 + Glu CTC [ENA]
Identical group No.242964 (12 seq.)
>A171000127 AP012489 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [AP012489] 1087031 1087108 + Glu CTC -
>WENV181228447 OFEH01000002 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 74684 74759 + Glu CTC [ENA]
>WENV181228725 OFEH01001816 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 3719 3793 + Glu CTC [ENA]
>WENV181229512 OFEJ01023627 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 740 665 - Glu CTC [ENA]
>WENV181406522 OGCG01000387 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 3757 3832 + Glu CTC [ENA]
>WENV181406592 OGCG01000582 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 10127 10052 - Glu CTC [ENA]
>At0013 BA000002 Thermoproteota Aeropyrum pernix K1 [BA000002] 1139987 1140064 + Glu CTC [Ensembl]
>WENV170668533 LAFT01013257 [LAFT] hot springs metagenome; hot springs water enriched for viruses sample NL10_1401_vDNA_Ovation_1.3g/mL 131 56 - Glu CTC [ENA]
>W1910015296 BDMD01000015 Thermoproteota Aeropyrum pernix YK1-12-2013 [BDMD] 24060 24137 + Glu CTC [ENA]
>W1911654388 QEFF01000116 Thermoproteota Acidilobus sp. SCGC AC-742_E15 [QEFF] 8021 7946 - Glu CTC [ENA]
>ENV09004083 ADKH01000143 Hot springs metagenome ctg_1106445186506 294 219 - Glu CTC [ENA]
>W1610045959 BBBZ01000010 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [BBBZ] 11571 11648 + Glu CTC [ENA]
Identical group No.244813 (2 seq.)
>A171001668 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 1312224 1312147 - Glu CTC -
>A171002408 CP002838 Thermoproteota Pyrolobus fumarii 1A [CP002838] 79641 79718 + Glu CTC -
Identical group No.244908 (3 seq.)
>A179000134 CP001939 Thermoproteota Thermosphaera aggregans DSM 11486 [CP001939] 871050 870939 - Glu CTC -
>A179000200 CP002363 Thermoproteota Desulfurococcus mucosus DSM 2162 [CP002363] 1100752 1100857 + Glu CTC -
>A179000356 CP003321 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [CP003321] 1177641 1177750 + Glu CTC -
Identical group No.245504 (3 seq.)
>At0254 CP000660 Thermoproteota Pyrobaculum arsenaticum DSM 13514 [CP000660] 572485 572390 - Glu CTC [Ensembl]
>At0291 CP000561 Thermoproteota Pyrobaculum calidifontis JCM 11548 [CP000561] 829919 830055 + Glu CTC [Ensembl]
>At0366 CP000504 Thermoproteota Pyrobaculum islandicum DSM 4184 [CP000504] 1447364 1447227 - Glu CTC [Ensembl]
Identical group No.248023 (2 seq.)
>A171000182 CP000852 Thermoproteota Caldivirga maquilingensis IC-167 [CP000852] 157508 157431 - Glu CTC -
>W1610000395 AAXQ01000001 Thermoproteota Caldivirga maquilingensis IC-167 [AAXQ] 1174732 1174809 + Glu CTC [ENA]
Identical group No.248405 (1 seq.)
>At0222 AE009441 Thermoproteota Pyrobaculum aerophilum str. IM2 [AE009441] 895474 895379 - Glu CTC [Ensembl]
Identical group No.252465 (3 seq.)
>A171001997 CP002535 Thermoproteota Acidianus hospitalis W1 [CP002535] 886441 886516 + Glu CTC -
>WENV181406283 OGCG01000079 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 64976 65051 + Glu CTC [ENA]
>W1911654362 QEFD01000173 Thermoproteota Acidianus hospitalis [QEFD] 3226 3151 - Glu CTC [ENA]
Identical group No.252773 (2 seq.)
>A173000336 CP020477 Thermoproteota Acidianus manzaensis YN-25 [CP020477] 1733347 1733437 + Glu CTC -
>WENV181406959 OGCG01003223 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 5461 5536 + Glu CTC [ENA]
Identical group No.255433 (3 seq.)
>A171003139 CP003378 Thermoproteota Caldisphaera lagunensis DSM 15908 [CP003378] 1222120 1222044 - Glu CTC -
>WENV181228504 OFEH01000087 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 12242 12316 + Glu CTC [ENA]
>WENV181407297 OGCG01015205 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 175 101 - Glu CTC [ENA]
Identical group No.261154 (1 seq.)
>A173000278 CP012158 Thermoproteota Pyrobaculum sp. WP30 [CP012158] 573055 572937 - Glu CTC -
Identical group No.261591 (2 seq.)
>A171003917 CP006867 Thermoproteota Ignicoccus islandicus DSM 13165 [CP006867] 651359 651436 + Glu CTC -
>At2230 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 1150195 1150118 - Glu CTC [Ensembl]
Identical group No.261602 (2 seq.)
>A179000156 CP002051 Thermoproteota Staphylothermus hellenicus DSM 12710 [CP002051] 1353353 1353242 - Glu CTC -
>At0395 CP000575 Thermoproteota Staphylothermus marinus F1 [CP000575] 1038694 1038805 + Glu CTC [Ensembl]
Identical group No.265361 (1 seq.)
>A171001001 CP001742 Thermoproteota Acidilobus saccharovorans 345-15 [CP001742] 441663 441586 - Glu CTC -
Identical group No.268551 (1 seq.)
>A17A000577 CP002656 Thermoproteota Metallosphaera cuprina Ar-4 [CP002656] 1192945 1192857 - Glu CTC -
Identical group No.268752 (1 seq.)
>At0151 CP000682 Thermoproteota Metallosphaera sedula DSM 5348 [CP000682] 773416 773505 + Glu CTC [Ensembl]
Identical group No.485722 (14 seq.)
>A17A000134 CP001399 Thermoproteota Sulfolobus islandicus L.S.2.15 [CP001399] 1381862 1381954 + Glu CTC -
>A17A000142 CP001400 Thermoproteota Sulfolobus islandicus M.14.25 [CP001400] 1305510 1305602 + Glu CTC -
>A17A000150 CP001401 Thermoproteota Sulfolobus islandicus M.16.27 [CP001401] 1385647 1385739 + Glu CTC -
>A17A000158 CP001402 Thermoproteota Sulfolobus islandicus M.16.4 [CP001402] 1292289 1292381 + Glu CTC -
>A17A000166 CP001403 Thermoproteota Sulfolobus islandicus Y.G.57.14 [CP001403] 1281191 1281283 + Glu CTC -
>A17A000177 CP001404 Thermoproteota Sulfolobus islandicus Y.N.15.51 [CP001404] 1282874 1282782 - Glu CTC -
>A17A000268 CP001800 Thermoproteota Saccharolobus solfataricus [CP001800] 1620543 1620453 - Glu CTC -
>A17A000512 CP002425 Thermoproteota Sulfolobus islandicus REY15A [CP002425] 1186784 1186876 + Glu CTC -
>A17A000520 CP002426 Thermoproteota Sulfolobus islandicus HVE10/4 [CP002426] 1322388 1322480 + Glu CTC -
>A17A000966 CP003928 Thermoproteota Sulfolobus islandicus LAL14/1 [CP003928] 1178938 1179030 + Glu CTC -
>A17A001332 CP011055 Thermoproteota Saccharolobus solfataricus SARC-B [CP011055] 1678725 1678635 - Glu CTC -
>A17A001340 CP011056 Thermoproteota Saccharolobus solfataricus SARC-C [CP011056] 1678726 1678636 - Glu CTC -
>A17A001348 CP011057 Thermoproteota Saccharolobus solfataricus SULA [CP011057] 1678743 1678653 - Glu CTC -
>A17A001843 LT549890 Thermoproteota Saccharolobus solfataricus P1 [LT549890] 667759 667669 - Glu CTC -
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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