tRNA genes clustered and arranged according to each identical group

Thermoproteota

Anticodon = CTT

HIT: 19 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.13500 (1 seq.)
>A171001661 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 1408234 1408326 + Lys CTT - ¡û
Identical group No.235732 (1 seq.)
>A178000006 AP012489 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [AP012489] 233009 232897 - Lys CTT - ¡û
Identical group No.248022 (2 seq.)
>A171000180 CP000852 Thermoproteota Caldivirga maquilingensis IC-167 [CP000852] 413091 413014 - Lys CTT - ¡û
>W1610000393 AAXQ01000001 Thermoproteota Caldivirga maquilingensis IC-167 [AAXQ] 919146 919223 + Lys CTT [ENA] ¡û
Identical group No.275054 (6 seq.)
>A178000257 CP002817 Thermoproteota Sulfolobus acidocaldarius N8 [CP002817] 607225 607123 - Lys CTT - ¡û
>A178000268 CP002818 Thermoproteota Sulfolobus acidocaldarius Ron12/I [CP002818] 607225 607123 - Lys CTT - ¡û
>A178000407 CP006977 Thermoproteota Sulfolobus acidocaldarius SUSAZ [CP006977] 558823 558925 + Lys CTT - ¡û
>A179000370 CP003378 Thermoproteota Caldisphaera lagunensis DSM 15908 [CP003378] 495440 495548 + Lys CTT - ¡û
>At0455 CP000077 Thermoproteota Sulfolobus acidocaldarius DSM 639 [CP000077] 607222 607121 - Lys CTT [Ensembl] ¡û
>At0513 BA000023 Thermoproteota Sulfurisphaera tokodaii str. 7 [BA000023] 211719 211819 + Lys CTT [Ensembl] ¡û
Identical group No.275061 (9 seq.)
>A171002941 CP003316 Thermoproteota Pyrobaculum oguniense TE7 [CP003316] 414489 414565 + Lys CTT - ¡û
>A179000030 CP001014 Thermoproteota Pyrobaculum neutrophilum V24Sta [CP001014] 1468775 1468870 + Lys CTT - ¡û
>A179000253 CP002590 Thermoproteota Thermoproteus uzoniensis 768-20 [CP002590] 1315092 1315002 - Lys CTT - ¡û
>At0204 AE009441 Thermoproteota Pyrobaculum aerophilum str. IM2 [AE009441] 1819457 1819530 + Lys CTT [Ensembl] ¡û
>At0268 CP000660 Thermoproteota Pyrobaculum arsenaticum DSM 13514 [CP000660] 1482655 1482579 - Lys CTT [Ensembl] ¡û
>At0305 CP000561 Thermoproteota Pyrobaculum calidifontis JCM 11548 [CP000561] 1688197 1688289 + Lys CTT [Ensembl] ¡û
>At0356 CP000504 Thermoproteota Pyrobaculum islandicum DSM 4184 [CP000504] 431619 431501 - Lys CTT [Ensembl] ¡û
>WENV170574183 FLYM01011831 [FLYM] hot springs metagenome; Sediment 4030 3954 - Lys CTT [ENA] ¢þ
>W1911075124 NMUE01000040 Thermoproteota Pyrobaculum aerophilum YKB31 [NMUE] 18077 18003 - Lys CTT [ENA] ¡û
Identical group No.288101 (12 seq.)
>A171000370 CP001140 Thermoproteota Desulfurococcus amylolyticus 1221n [CP001140] 335886 335812 - Lys CTT - ¡û
>A171001347 CP001939 Thermoproteota Thermosphaera aggregans DSM 11486 [CP001939] 197889 197815 - Lys CTT - ¡û
>A171002965 CP003321 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [CP003321] 368024 368098 + Lys CTT - ¡û
>A171003240 CP003531 Thermoproteota Thermogladius calderae 1633 [CP003531] 1339642 1339568 - Lys CTT - ¡û
>WENV181229057 OFEJ01000164 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 19667 19593 - Lys CTT [ENA] ¢þ
>WENV181229290 OFEJ01003211 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 3495 3421 - Lys CTT [ENA] ¢þ
>WENV181285462 OFGS01000604 [OFGS] hot springs metagenome; Water and soil 4987 5061 + Lys CTT [ENA] ¢þ
>At0021 BA000002 Thermoproteota Aeropyrum pernix K1 [BA000002] 236428 236316 - Lys CTT [Ensembl] ¡û
>At2206 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 557836 557944 + Lys CTT [Ensembl] ¡û
>At2231 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 1057036 1056928 - Lys CTT [Ensembl] ¡û
>W1610004223 AGIW01000001 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [AGIW] 742295 742221 - Lys CTT [ENA] ¡û
>W1610040452 AZUU01000001 Thermoproteota Desulfurococcus amylolyticus Z-533 [AZUU] 495802 495876 + Lys CTT [ENA] ¡û
Identical group No.288172 (4 seq.)
>A171001689 CP002100 Thermoproteota Vulcanisaeta distributa DSM 14429 [CP002100] 1532707 1532781 + Lys CTT - ¡û
>WENV181229468 OFEJ01016858 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 44 120 + Lys CTT [ENA] ¢þ
>W1610024276 ATWG01000001 Thermoproteota Stygiolobus azoricus DSM 6296 [ATWG] 572488 572412 - Lys CTT [ENA] ¡û
>W1610781357 LOCE01000084 Thermoproteota Vulcanisaeta sp. JCHS_4 [LOCE] 2304 2228 - Lys CTT [ENA] ¡û
Identical group No.301921 (15 seq.)
>A178000039 CP001399 Thermoproteota Sulfolobus islandicus L.S.2.15 [CP001399] 1941049 1941145 + Lys CTT - ¡û
>A178000049 CP001400 Thermoproteota Sulfolobus islandicus M.14.25 [CP001400] 1809605 1809701 + Lys CTT - ¡û
>A178000059 CP001401 Thermoproteota Sulfolobus islandicus M.16.27 [CP001401] 1913633 1913729 + Lys CTT - ¡û
>A178000069 CP001402 Thermoproteota Sulfolobus islandicus M.16.4 [CP001402] 1813865 1813961 + Lys CTT - ¡û
>A178000079 CP001403 Thermoproteota Sulfolobus islandicus Y.G.57.14 [CP001403] 1879268 1879364 + Lys CTT - ¡û
>A178000084 CP001404 Thermoproteota Sulfolobus islandicus Y.N.15.51 [CP001404] 746454 746358 - Lys CTT - ¡û
>A178000105 CP001800 Thermoproteota Saccharolobus solfataricus [CP001800] 1065727 1065631 - Lys CTT - ¡û
>A178000193 CP002425 Thermoproteota Sulfolobus islandicus REY15A [CP002425] 1707449 1707545 + Lys CTT - ¡û
>A178000203 CP002426 Thermoproteota Sulfolobus islandicus HVE10/4 [CP002426] 1843498 1843594 + Lys CTT - ¡û
>A178000358 CP003928 Thermoproteota Sulfolobus islandicus LAL14/1 [CP003928] 1678998 1679094 + Lys CTT - ¡û
>A178000526 CP011055 Thermoproteota Saccharolobus solfataricus SARC-B [CP011055] 1123890 1123794 - Lys CTT - ¡û
>A178000536 CP011056 Thermoproteota Saccharolobus solfataricus SARC-C [CP011056] 1123893 1123797 - Lys CTT - ¡û
>A178000546 CP011057 Thermoproteota Saccharolobus solfataricus SULA [CP011057] 1123917 1123821 - Lys CTT - ¡û
>A178000685 CP017006 Thermoproteota Sulfolobus sp. A20 [CP017006] 896404 896498 + Lys CTT - ¡û
>A178000743 LT549890 Thermoproteota Saccharolobus solfataricus P1 [LT549890] 139413 139317 - Lys CTT - ¡û
Identical group No.301929 (8 seq.)
>A178000246 CP002656 Thermoproteota Metallosphaera cuprina Ar-4 [CP002656] 1727858 1727767 - Lys CTT - ¡û
>A178000570 CP012172 Thermoproteota Metallosphaera sedula ARS50-1 [CP012172] 141508 141599 + Lys CTT - ¡û
>A178000587 CP012173 Thermoproteota Metallosphaera sedula ARS50-2 [CP012173] 141508 141599 + Lys CTT - ¡û
>A178000604 CP012174 Thermoproteota Metallosphaera sedula ARS120-1 [CP012174] 141506 141597 + Lys CTT - ¡û
>A178000621 CP012175 Thermoproteota Metallosphaera sedula ARS120-2 [CP012175] 141508 141599 + Lys CTT - ¡û
>A178000638 CP012176 Thermoproteota Metallosphaera sedula SARC-M1 [CP012176] 141508 141599 + Lys CTT - ¡û
>A177000029 CP002656 Thermoproteota Metallosphaera cuprina Ar-4 [CP002656] 1727858 1727770 - Lys CTT - ¡û
>At0147 CP000682 Thermoproteota Metallosphaera sedula DSM 5348 [CP000682] 141492 141583 + Lys CTT [Ensembl] ¡û
Identical group No.322035 (2 seq.)
>A17A001066 CP006646 Thermoproteota Thermofilum adornatum 1910b [CP006646] 592886 592792 - Lys CTT - ¡û
>A17A001190 CP007493 Thermoproteota Thermofilum adornatum 1505 [CP007493] 1545406 1545312 - Lys CTT - ¡û
Identical group No.343266 (5 seq.)
>A171001848 CP002363 Thermoproteota Desulfurococcus mucosus DSM 2162 [CP002363] 764599 764525 - Lys CTT - ¡û
>WENV181404306 OGCA01000004 [OGCA] hot springs metagenome; Conch Spring, Yellowstone National Park, Wyoming, USA 8300 8224 - Lys CTT [ENA] ¢þ
>WENV181404809 OGCB01000349 [OGCB] hot springs metagenome; Octopus Spring Streamers, Yellowstone National Park, Wyoming, USA 1001 925 - Lys CTT [ENA] ¢þ
>WENV181405456 OGCE01000141 [OGCE] hot springs metagenome; Octopus Spring, Yellowstone National Park, Wyoming, USA 27470 27546 + Lys CTT [ENA] ¢þ
>W1910003082 AUQX01000005 Thermoproteota Desulfurococcus mucosus DSM 2161 [AUQX] 10498 10572 + Lys CTT [ENA] ¡û
Identical group No.349165 (3 seq.)
>A171002407 CP002838 Thermoproteota Pyrolobus fumarii 1A [CP002838] 46095 46171 + Lys CTT - ¡û
>SRA1006155 SRR016610.106656 Metagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749) 137 213 + Lys CTT [SRA]
>SRA1006169 SRR016610.131599 Metagenomic analysis of deep-sea hydrothermal vent prokaryotes (SRP000749) 35 111 + Lys CTT [SRA]
Identical group No.349705 (2 seq.)
>A178000713 CP020477 Thermoproteota Acidianus manzaensis YN-25 [CP020477] 1663010 1663100 + Lys CTT - ¡û
>A177000068 CP020477 Thermoproteota Acidianus manzaensis YN-25 [CP020477] 1663010 1663097 + Lys CTT - ¡û
Identical group No.391930 (2 seq.)
>A178000667 CP013011 Thermoproteota Pyrodictium delaneyi Su06 [CP013011] 1818271 1818167 - Lys CTT - ¡û
>At0135 CP000493 Thermoproteota Hyperthermus butylicus DSM 5456 [CP000493] 1029253 1029145 - Lys CTT [Ensembl] ¡û
Identical group No.399310 (1 seq.)
>A178000219 CP002535 Thermoproteota Acidianus hospitalis W1 [CP002535] 814585 814675 + Lys CTT - ¡û
Identical group No.401159 (1 seq.)
>At0594 CP000505 Thermoproteota Thermofilum pendens Hrk 5 [CP000505] 438741 438644 - Lys CTT [Ensembl] ¡û
Identical group No.407531 (1 seq.)
>A179000450 CP006867 Thermoproteota Ignicoccus islandicus DSM 13165 [CP006867] 657005 656909 - Lys CTT - ¡û
Identical group No.422949 (1 seq.)
>A179000104 CP001742 Thermoproteota Acidilobus saccharovorans 345-15 [CP001742] 1038800 1038701 - Lys CTT - ¡û
Identical group No.463132 (1 seq.)
>At0490 AE006641 Thermoproteota Saccharolobus solfataricus P2 [AE006641] 138445 138351 - Lys CTT [Ensembl] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK