tRNA genes clustered and arranged according to each identical group

Thermoproteota

Anticodon = GTT

HIT: 30 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.46110 (21 seq.)
>A177000005 CP001399 Thermoproteota Sulfolobus islandicus L.S.2.15 [CP001399] 2020998 2020912 - Asn GTT -
>A177000006 CP001400 Thermoproteota Sulfolobus islandicus M.14.25 [CP001400] 1888917 1888831 - Asn GTT -
>A177000007 CP001401 Thermoproteota Sulfolobus islandicus M.16.27 [CP001401] 1995013 1994927 - Asn GTT -
>A177000008 CP001402 Thermoproteota Sulfolobus islandicus M.16.4 [CP001402] 1893178 1893092 - Asn GTT -
>A177000009 CP001403 Thermoproteota Sulfolobus islandicus Y.G.57.14 [CP001403] 1959219 1959133 - Asn GTT -
>A177000010 CP001404 Thermoproteota Sulfolobus islandicus Y.N.15.51 [CP001404] 666501 666587 + Asn GTT -
>A177000011 CP001800 Thermoproteota Saccharolobus solfataricus [CP001800] 975555 975641 + Asn GTT -
>A177000037 CP003928 Thermoproteota Sulfolobus islandicus LAL14/1 [CP003928] 1759611 1759525 - Asn GTT -
>W1911654406 QEFG01000007 Thermoproteota Sulfolobus islandicus [QEFG] 2579 2666 + Asn GTT [ENA]
>W1610001096 ACQS01000011 Thermoproteota Saccharolobus solfataricus Feb-98 [ACQS] 68606 68517 - Asn GTT [ENA]
>W1610001509 ACUK01000028 Thermoproteota Saccharolobus solfataricus Feb-98 [ACUK] 6622 6711 + Asn GTT [ENA]
>W1610004552 AHJK01000001 Thermoproteota Sulfolobus islandicus M.16.2 [AHJK] 1937386 1937299 - Asn GTT [ENA]
>W1610004582 AHJL01000005 Thermoproteota Sulfolobus islandicus M.16.12 [AHJL] 977432 977345 - Asn GTT [ENA]
>W1610004611 AHJM01000003 Thermoproteota Sulfolobus islandicus M.16.13 [AHJM] 1045466 1045379 - Asn GTT [ENA]
>W1610004639 AHJN01000003 Thermoproteota Sulfolobus islandicus M.16.22 [AHJN] 976724 976637 - Asn GTT [ENA]
>W1610004667 AHJO01000001 Thermoproteota Sulfolobus islandicus M.16.23 [AHJO] 1908937 1908850 - Asn GTT [ENA]
>W1610004697 AHJP01000004 Thermoproteota Sulfolobus islandicus M.16.30 [AHJP] 1018678 1018591 - Asn GTT [ENA]
>W1610004725 AHJQ01000001 Thermoproteota Sulfolobus islandicus M.16.40 [AHJQ] 1924744 1924657 - Asn GTT [ENA]
>W1610004754 AHJR01000001 Thermoproteota Sulfolobus islandicus M.16.43 [AHJR] 1890443 1890356 - Asn GTT [ENA]
>W1610004784 AHJS01000002 Thermoproteota Sulfolobus islandicus M.16.46 [AHJS] 1079461 1079374 - Asn GTT [ENA]
>W1610004812 AHJT01000001 Thermoproteota Sulfolobus islandicus M.16.47 [AHJT] 1941620 1941533 - Asn GTT [ENA]
Identical group No.87324 (3 seq.)
>A172000015 CP002100 Thermoproteota Vulcanisaeta distributa DSM 14429 [CP002100] 1737093 1737180 + Asn GTT -
>W1610024277 ATWG01000001 Thermoproteota Stygiolobus azoricus DSM 6296 [ATWG] 368102 368015 - Asn GTT [ENA]
>W1610046784 BBCS01000001 Thermoproteota Vulcanisaeta distributa JCM 11213 [BBCS] 15487 15400 - Asn GTT [ENA]
Identical group No.237738 (1 seq.)
>A17A000067 CP001014 Thermoproteota Pyrobaculum neutrophilum V24Sta [CP001014] 774257 774141 - Asn GTT -
Identical group No.245500 (4 seq.)
>A171002961 CP003316 Thermoproteota Pyrobaculum oguniense TE7 [CP003316] 143680 143604 - Asn GTT -
>WENV180013871 FPIC01006059 [FPIC] soil metagenome; Soil 30835 30759 - Asn GTT [ENA]
>At0247 CP000660 Thermoproteota Pyrobaculum arsenaticum DSM 13514 [CP000660] 1755536 1755610 + Asn GTT [Ensembl]
>At0319 CP000561 Thermoproteota Pyrobaculum calidifontis JCM 11548 [CP000561] 1088212 1088102 - Asn GTT [Ensembl]
Identical group No.248404 (1 seq.)
>At0214 AE009441 Thermoproteota Pyrobaculum aerophilum str. IM2 [AE009441] 2099023 2099110 + Asn GTT [Ensembl]
Identical group No.260126 (1 seq.)
>At0361 CP000504 Thermoproteota Pyrobaculum islandicum DSM 4184 [CP000504] 713260 713145 - Asn GTT [Ensembl]
Identical group No.288124 (9 seq.)
>A171000163 CP000852 Thermoproteota Caldivirga maquilingensis IC-167 [CP000852] 1443352 1443426 + Asn GTT -
>WENV181228481 OFEH01000041 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 39578 39654 + Asn GTT [ENA]
>WENV181229171 OFEJ01000954 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 78 2 - Asn GTT [ENA]
>WENV181406406 OGCG01000221 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 32311 32235 - Asn GTT [ENA]
>W1610000403 AAXQ01000001 Thermoproteota Caldivirga maquilingensis IC-167 [AAXQ] 1966455 1966379 - Asn GTT [ENA]
>W1610584527 LCTF01000009 Thermoproteota Caldivirga sp. MU80 [LCTF] 9591 9667 + Asn GTT [ENA]
>W1610781304 LOCB01000069 Thermoproteota Caldivirga sp. MG_3 [LOCB] 1516 1592 + Asn GTT [ENA]
>W1610781321 LOCC01000071 Thermoproteota Caldivirga sp. CIS_19 [LOCC] 5618 5694 + Asn GTT [ENA]
>W1610781332 LOCD01000007 Thermoproteota Caldivirga sp. JCHS_4 [LOCD] 4374 4298 - Asn GTT [ENA]
Identical group No.301860 (4 seq.)
>A171000147 AP012489 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [AP012489] 412469 412393 - Asn GTT -
>At0029 BA000002 Thermoproteota Aeropyrum pernix K1 [BA000002] 402462 402386 - Asn GTT [Ensembl]
>W1910015310 BDMD01000050 Thermoproteota Aeropyrum pernix YK1-12-2013 [BDMD] 3057 3133 + Asn GTT [ENA]
>W1610045962 BBBZ01000011 Thermoproteota Aeropyrum camini SY1 = JCM 12091 [BBBZ] 42602 42676 + Asn GTT [ENA]
Identical group No.301927 (1 seq.)
>A178000326 CP003321 Thermoproteota Desulfurococcus amylolyticus DSM 16532 [CP003321] 1336482 1336379 - Asn GTT -
Identical group No.338261 (3 seq.)
>A171001970 CP002529 Thermoproteota Vulcanisaeta moutnovskia 768-28 [CP002529] 273264 273340 + Asn GTT -
>A179000179 CP002100 Thermoproteota Vulcanisaeta distributa DSM 14429 [CP002100] 1737093 1737180 + Asn GTT -
>W1610045278 BBBJ01000004 Thermoproteota Vulcanisaeta distributa JCM 11217 [BBBJ] 112782 112858 + Asn GTT [ENA]
Identical group No.361485 (2 seq.)
>A178000026 CP001140 Thermoproteota Desulfurococcus amylolyticus 1221n [CP001140] 1231174 1231071 - Asn GTT -
>A178000179 CP002363 Thermoproteota Desulfurococcus mucosus DSM 2162 [CP002363] 1263970 1263868 - Asn GTT -
Identical group No.391909 (1 seq.)
>A178000133 CP001939 Thermoproteota Thermosphaera aggregans DSM 11486 [CP001939] 1245998 1245864 - Asn GTT -
Identical group No.391914 (1 seq.)
>A178000346 CP003531 Thermoproteota Thermogladius calderae 1633 [CP003531] 382301 382203 - Asn GTT -
Identical group No.399317 (1 seq.)
>A179000713 FN869859 Thermoproteota Thermoproteus tenax Kra 1 [FN869859] 1215120 1215016 - Asn GTT -
Identical group No.401158 (1 seq.)
>At0563 CP000505 Thermoproteota Thermofilum pendens Hrk 5 [CP000505] 320654 320783 + Asn GTT [Ensembl]
Identical group No.402215 (2 seq.)
>A178000154 CP002051 Thermoproteota Staphylothermus hellenicus DSM 12710 [CP002051] 1525973 1525869 - Asn GTT -
>At0389 CP000575 Thermoproteota Staphylothermus marinus F1 [CP000575] 851283 851387 + Asn GTT [Ensembl]
Identical group No.456314 (4 seq.)
>A178000262 CP002817 Thermoproteota Sulfolobus acidocaldarius N8 [CP002817] 2131706 2131620 - Asn GTT -
>A178000273 CP002818 Thermoproteota Sulfolobus acidocaldarius Ron12/I [CP002818] 2179327 2179241 - Asn GTT -
>A178000410 CP006977 Thermoproteota Sulfolobus acidocaldarius SUSAZ [CP006977] 2017671 2017585 - Asn GTT -
>At0466 CP000077 Thermoproteota Sulfolobus acidocaldarius DSM 639 [CP000077] 2181303 2181218 - Asn GTT [Ensembl]
Identical group No.461066 (15 seq.)
>A179000059 CP001399 Thermoproteota Sulfolobus islandicus L.S.2.15 [CP001399] 2020998 2020912 - Asn GTT -
>A179000065 CP001400 Thermoproteota Sulfolobus islandicus M.14.25 [CP001400] 1888917 1888831 - Asn GTT -
>A179000071 CP001401 Thermoproteota Sulfolobus islandicus M.16.27 [CP001401] 1995013 1994927 - Asn GTT -
>A179000077 CP001402 Thermoproteota Sulfolobus islandicus M.16.4 [CP001402] 1893178 1893092 - Asn GTT -
>A179000083 CP001403 Thermoproteota Sulfolobus islandicus Y.G.57.14 [CP001403] 1959219 1959133 - Asn GTT -
>A179000085 CP001404 Thermoproteota Sulfolobus islandicus Y.N.15.51 [CP001404] 666501 666587 + Asn GTT -
>A179000109 CP001800 Thermoproteota Saccharolobus solfataricus [CP001800] 975555 975641 + Asn GTT -
>A179000217 CP002425 Thermoproteota Sulfolobus islandicus REY15A [CP002425] 1786821 1786735 - Asn GTT -
>A179000223 CP002426 Thermoproteota Sulfolobus islandicus HVE10/4 [CP002426] 1924079 1923993 - Asn GTT -
>A179000414 CP003928 Thermoproteota Sulfolobus islandicus LAL14/1 [CP003928] 1759611 1759525 - Asn GTT -
>A179000568 CP011055 Thermoproteota Saccharolobus solfataricus SARC-B [CP011055] 1033718 1033804 + Asn GTT -
>A179000574 CP011056 Thermoproteota Saccharolobus solfataricus SARC-C [CP011056] 1033696 1033782 + Asn GTT -
>A179000580 CP011057 Thermoproteota Saccharolobus solfataricus SULA [CP011057] 1033733 1033819 + Asn GTT -
>A179000730 LT549890 Thermoproteota Saccharolobus solfataricus P1 [LT549890] 50310 50396 + Asn GTT -
>At0468 AE006641 Thermoproteota Saccharolobus solfataricus P2 [AE006641] 49344 49430 + Asn GTT [Ensembl]
Identical group No.463131 (1 seq.)
>At0558 BA000023 Thermoproteota Sulfurisphaera tokodaii str. 7 [BA000023] 2241492 2241417 - Asn GTT [Ensembl]
Identical group No.470475 (2 seq.)
>A171001659 CP002098 Thermoproteota Ignisphaera aggregans DSM 17230 [CP002098] 1287858 1287931 + Asn GTT -
>WENV181229049 OFEJ01000133 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 4796 4870 + Asn GTT [ENA]
Identical group No.470501 (2 seq.)
>A171003203 CP003423 Thermoproteota Fervidicoccus fontis Kam940 [CP003423] 1315719 1315645 - Asn GTT -
>WENV181229244 OFEJ01002339 [OFEJ] sediment metagenome; Joseph's Coat, Yellowstone National Park, Wyoming, USA 4343 4416 + Asn GTT [ENA]
Identical group No.485724 (7 seq.)
>A171002157 CP002656 Thermoproteota Metallosphaera cuprina Ar-4 [CP002656] 134407 134334 - Asn GTT -
>A178000579 CP012172 Thermoproteota Metallosphaera sedula ARS50-1 [CP012172] 2052691 2052601 - Asn GTT -
>A178000596 CP012173 Thermoproteota Metallosphaera sedula ARS50-2 [CP012173] 2052687 2052597 - Asn GTT -
>A178000613 CP012174 Thermoproteota Metallosphaera sedula ARS120-1 [CP012174] 2052689 2052599 - Asn GTT -
>A178000630 CP012175 Thermoproteota Metallosphaera sedula ARS120-2 [CP012175] 2052691 2052601 - Asn GTT -
>A178000647 CP012176 Thermoproteota Metallosphaera sedula SARC-M1 [CP012176] 2052691 2052601 - Asn GTT -
>At0182 CP000682 Thermoproteota Metallosphaera sedula DSM 5348 [CP000682] 2052675 2052586 - Asn GTT [Ensembl]
Identical group No.537180 (3 seq.)
>A171002015 CP002535 Thermoproteota Acidianus hospitalis W1 [CP002535] 566556 566483 - Asn GTT -
>WENV181406343 OGCG01000138 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 29825 29752 - Asn GTT [ENA]
>W1911654366 QEFD01000192 Thermoproteota Acidianus hospitalis [QEFD] 7083 7156 + Asn GTT [ENA]
Identical group No.538537 (1 seq.)
>A178000708 CP020477 Thermoproteota Acidianus manzaensis YN-25 [CP020477] 1411107 1411195 + Asn GTT -
Identical group No.556676 (3 seq.)
>A171000976 CP001742 Thermoproteota Acidilobus saccharovorans 345-15 [CP001742] 205696 205771 + Asn GTT -
>WENV181228469 OFEH01000029 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 27251 27176 - Asn GTT [ENA]
>WENV181406530 OGCG01000397 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 7165 7090 - Asn GTT [ENA]
Identical group No.556786 (3 seq.)
>A171003125 CP003378 Thermoproteota Caldisphaera lagunensis DSM 15908 [CP003378] 411771 411845 + Asn GTT -
>WENV181228710 OFEH01001424 [OFEH] hypersaline lake metagenome; Grendel Spring, Yellowstone National Park, Wyoming, USA 2149 2076 - Asn GTT [ENA]
>WENV181407130 OGCG01007112 [OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA 886 813 - Asn GTT [ENA]
Identical group No.563636 (1 seq.)
>A171002418 CP002838 Thermoproteota Pyrolobus fumarii 1A [CP002838] 609228 609303 + Asn GTT -
Identical group No.585679 (4 seq.)
>A171006441 CP013011 Thermoproteota Pyrodictium delaneyi Su06 [CP013011] 1199778 1199703 - Asn GTT -
>At0109 CP000493 Thermoproteota Hyperthermus butylicus DSM 5456 [CP000493] 1143028 1143103 + Asn GTT [Ensembl]
>W1910869992 NCQP01000001 Thermoproteota Pyrodictium delaneyi Hulk [NCQP] 465403 465478 + Asn GTT [ENA]
>W1610772501 LNTB01000001 Thermoproteota Pyrodictium occultum PL-19 [LNTB] 1041345 1041420 + Asn GTT [ENA]
Identical group No.596111 (2 seq.)
>A171003937 CP006867 Thermoproteota Ignicoccus islandicus DSM 13165 [CP006867] 404349 404274 - Asn GTT -
>At2233 CP000816 Thermoproteota Ignicoccus hospitalis KIN4/I [CP000816] 882007 881932 - Asn GTT [Ensembl]
Identical group No.603284 (1 seq.)
>A179000663 CP017006 Thermoproteota Sulfolobus sp. A20 [CP017006] 1001000 1000915 - Asn GTT -
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK