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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085285
BABC01000164
95593
Actinomycetota
>WENV085304
BABC01000267
144589
Actinomycetota
ACG
Arg
>WENV085305
BABC01000267
144589
Actinomycetota
ACG
Arg
>WENV085268
BABC01000064
158720
Actinomycetota
ACG
Arg
>WENV085267
BABC01000064
158720
Actinomycetota
ACG
Arg
>WENV085292
BABC01000209
144595
Actinomycetota
CAA
Leu
>WENV085238
BABC01000007
144595
Actinomycetota
CAA
Leu
>WENV085404
BABC01004397
235199
Actinomycetota
CAC
Val
>WENV085296
BABC01000229
235199
Actinomycetota
CAC
Val
>WENV085275
BABC01000113
235199
Actinomycetota
CAC
Val
>WENV085355
BABC01000802
80667
Actinomycetota
CAG
Leu
>WENV085344
BABC01000437
91808
Actinomycetota
CAG
Leu
>WENV085270
BABC01000077
80622
Actinomycetota
CAG
Leu
>WENV085284
BABC01000164
144700
Actinomycetota
CAT
Met
>WENV085256
BABC01000024
144825
Actinomycetota
CAT
Met
>WENV085426
BABC01007224
411554
Actinomycetota
CCC
Gly
>WENV085425
BABC01007122
411554
Actinomycetota
CCC
Gly
>WENV085408
BABC01005263
411554
Actinomycetota
CCC
Gly
>WENV085393
BABC01002101
411554
Actinomycetota
CCC
Gly
>WENV085272
BABC01000097
431657
Actinomycetota
CCC
Gly
>WENV085346
BABC01000476
254857
Actinomycetota
CCG
Arg
>WENV085271
BABC01000096
254857
Actinomycetota
CCG
Arg
>WENV085356
BABC01000885
235850
Actinomycetota
CCG
Arg
>WENV085273
BABC01000103
235348
Actinomycetota
CCT
Arg
>WENV085375
BABC01001270
38674
Actinomycetota
CGA
Ser
>WENV085290
BABC01000182
45852
Actinomycetota
CGA
Ser
>WENV085400
BABC01003032
235146
Actinomycetota
CGT
Thr
>WENV085358
BABC01000948
313386
Actinomycetota
CGT
Thr
>WENV085286
BABC01000166
313386
Actinomycetota
CGT
Thr
>WENV085260
BABC01000036
313386
Actinomycetota
CGT
Thr
>WENV085339
BABC01000407
235121
Actinomycetota
CGT
Thr
>WENV085307
BABC01000300
235121
Actinomycetota
CGT
Thr
>WENV085445
BABC01009101
295695
Actinomycetota
CTC
Glu
>WENV085233
BABC01000002
295695
Actinomycetota
CTC
Glu
>WENV085234
BABC01000002
367535
Actinomycetota
CTG
Gln
>WENV085446
BABC01009101
338148
Actinomycetota
CTG
Gln
>WENV085303
BABC01000260
338148
Actinomycetota
CTG
Gln
>WENV085255
BABC01000018
201717
Actinomycetota
CTT
Lys
>WENV085297
BABC01000229
356045
Actinomycetota
GAC
Val
>WENV085276
BABC01000113
356045
Actinomycetota
GAC
Val
>WENV085280
BABC01000125
16222
Actinomycetota
GAG
Leu
>WENV085258
BABC01000029
174149
Actinomycetota
GAT
Ile
>WENV085283
BABC01000164
23370
Actinomycetota
GCT
Ser
>WENV085314
BABC01000353
16219
Actinomycetota
GCT
Ser
>WENV085442
BABC01008354
44929
Actinomycetota
GGA
Ser
>WENV085381
BABC01001614
44929
Actinomycetota
GGA
Ser
>WENV085235
BABC01000002
53078
Actinomycetota
GGA
Ser
>WENV085293
BABC01000223
235347
Actinomycetota
GGC
Ala
>WENV085294
BABC01000223
235347
Actinomycetota
GGC
Ala
>WENV085429
BABC01007841
235347
Actinomycetota
GGC
Ala
>WENV085430
BABC01007841
235347
Actinomycetota
GGC
Ala
>WENV085338
BABC01000406
235173
Actinomycetota
GGC
Ala
>WENV085315
BABC01000356
235173
Actinomycetota
GGC
Ala
>WENV085266
BABC01000063
144826
Actinomycetota
GGG
Pro
>WENV085423
BABC01006220
145343
Actinomycetota
GGG
Pro
>WENV085347
BABC01000538
145343
Actinomycetota
GGG
Pro
>WENV085309
BABC01000302
98279
Actinomycetota
GTA
Tyr
>WENV085362
BABC01001130
147732
Actinomycetota
GTC
Asp
>WENV085361
BABC01001130
147732
Actinomycetota
GTC
Asp
>WENV085291
BABC01000193
235194
Actinomycetota
GTG
His
>WENV085354
BABC01000770
235148
Actinomycetota
GTT
Asn
>WENV085353
BABC01000770
235148
Actinomycetota
GTT
Asn
>WENV085350
BABC01000552
235148
Actinomycetota
GTT
Asn
>WENV085274
BABC01000111
235148
Actinomycetota
GTT
Asn
>WENV085281
BABC01000140
243162
Actinomycetota
GTT
Asn
>WENV085288
BABC01000173
119508
Actinomycetota
TAA
Leu
>WENV085264
BABC01000054
145345
Actinomycetota
TAC
Val
>WENV085240
BABC01000016
145345
Actinomycetota
TAC
Val
>WENV085398
BABC01002932
198659
Actinomycetota
TAC
Val
>WENV085359
BABC01000948
113601
Actinomycetota
TAG
Leu
>WENV085340
BABC01000407
113601
Actinomycetota
TAG
Leu
>WENV085308
BABC01000300
113601
Actinomycetota
TAG
Leu
>WENV085287
BABC01000166
113601
Actinomycetota
TAG
Leu
>WENV085261
BABC01000036
113601
Actinomycetota
TAG
Leu
>WENV085282
BABC01000157
144823
Actinomycetota
TCT
Arg
>WENV085447
BABC01009214
45154
Actinomycetota
TGA
Ser
>WENV085239
BABC01000013
45154
Actinomycetota
TGA
Ser
>WENV085337
BABC01000406
305322
Actinomycetota
TGC
Ala
>WENV085257
BABC01000029
235174
Actinomycetota
TGC
Ala
>WENV085237
BABC01000007
144600
Actinomycetota
TGG
Pro
>WENV085443
BABC01008702
144600
Actinomycetota
TGG
Pro
>WENV085313
BABC01000334
144635
Actinomycetota
TGG
Pro
>WENV085431
BABC01007910
338239
Actinomycetota
TTC
Glu
>WENV085278
BABC01000116
338239
Actinomycetota
TTC
Glu
>WENV085331
BABC01000391
393408
Actinomycetota
TTC
Glu
>WENV085417
BABC01005728
413665
Actinomycetota
TTG
Gln
>WENV085236
BABC01000006
413665
Actinomycetota
TTG
Gln
>WENV085265
BABC01000059
235101
Actinomycetota
TTT
Lys
>WENV085301
BABC01000253
235848
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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