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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085585
BABD01001445
175926
Actinomycetota
CAT
Met
>WENV085606
BABD01002125
150272
Actinomycetota
TAA
Leu
>WENV085607
BABD01002152
20208
Actinomycetota
GAG
Leu
>WENV085627
BABD01002924
140768
Actinomycetota
TAG
Leu
>WENV085626
BABD01002924
280470
Actinomycetota
CGT
Thr
>WENV085637
BABD01003250
280702
Actinomycetota
GGC
Ala
>WENV085650
BABD01003787
280489
Actinomycetota
CTC
Glu
>WENV085656
BABD01003971
483206
Actinomycetota
CTG
Gln
>WENV085671
BABD01004824
280703
Actinomycetota
CCT
Arg
>WENV085687
BABD01005793
191955
Actinomycetota
TGT
Thr
>WENV085689
BABD01005982
280498
Actinomycetota
GTT
Asn
>WENV085688
BABD01005982
295964
Actinomycetota
GTT
Asn
>WENV085690
BABD01006356
317680
Actinomycetota
CCG
Arg
>WENV085713
BABD01007720
480376
Actinomycetota
CCC
Gly
>WENV085848
BABD01020273
46642
Actinomycetota
CGA
Ser
>WENV085850
BABD01020858
398853
Actinomycetota
CTG
Gln
>WENV085851
BABD01020858
289788
Actinomycetota
CTC
Glu
>WENV085898
BABD01030123
176075
Actinomycetota
TCT
Arg
>WENV085914
BABD01032645
398948
Actinomycetota
TTC
Glu
>WENV085929
BABD01035293
222475
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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