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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086411
BABF01002400
451658
Actinomycetota
CCG
Arg
>WENV086467
BABF01006322
451658
Actinomycetota
CCG
Arg
>WENV086466
BABF01006128
451405
Actinomycetota
CTC
Glu
>WENV086485
BABF01008774
270710
Actinomycetota
CAT
Met
>WENV086490
BABF01010041
270710
Actinomycetota
CAT
Met
>WENV086394
BABF01001832
451359
Actinomycetota
TTT
Lys
>WENV086488
BABF01009305
451659
Actinomycetota
CCT
Arg
>WENV086423
BABF01003010
451474
Actinomycetota
CAC
Val
>WENV086424
BABF01003010
653394
Actinomycetota
GAC
Val
>WENV086522
BABF01013257
653394
Actinomycetota
GAC
Val
>WENV086536
BABF01014878
779444
Actinomycetota
TTG
Gln
>WENV086353
BABF01000820
153702
Actinomycetota
CAG
Leu
>WENV086531
BABF01014144
45685
Actinomycetota
GCT
Ser
>WENV086331
BABF01000544
45685
Actinomycetota
GCT
Ser
>WENV086465
BABF01006128
653368
Actinomycetota
CTG
Gln
>WENV086438
BABF01003917
270704
Actinomycetota
ACG
Arg
>WENV086439
BABF01003917
270704
Actinomycetota
ACG
Arg
>WENV086529
BABF01013996
458839
Actinomycetota
CGT
Thr
>WENV086521
BABF01013257
779447
Actinomycetota
GCA
Cys
>WENV086403
BABF01002253
232508
Actinomycetota
TAA
Leu
>WENV086418
BABF01002972
270417
Actinomycetota
CAA
Leu
>WENV086460
BABF01005188
779446
Actinomycetota
CCC
Gly
>WENV086393
BABF01001685
451410
Actinomycetota
CGT
Thr
>WENV086387
BABF01001568
30300
Actinomycetota
GAG
Leu
>WENV086389
BABF01001647
86885
Actinomycetota
GGA
Ser
>WENV086484
BABF01008537
780405
Actinomycetota
CCC
Gly
>WENV086426
BABF01003052
270498
Actinomycetota
TAC
Val
>WENV086445
BABF01004177
270706
Actinomycetota
TGT
Thr
>WENV086517
BABF01012372
653480
Actinomycetota
TTC
Glu
>WENV086469
BABF01006842
653480
Actinomycetota
TTC
Glu
>WENV086428
BABF01003241
270545
Actinomycetota
CAT
Met
>WENV086442
BABF01004144
270711
Actinomycetota
GGG
Pro
>WENV086491
BABF01010923
451657
Actinomycetota
GGC
Ala
>WENV086429
BABF01003241
179947
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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