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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170035325
CDYM01012229
175907
Actinomycetota
TAC
Val
>WENV170035603
CDYM01024504
280498
Actinomycetota
GTT
Asn
>WENV170035604
CDYM01024504
280498
Actinomycetota
GTT
Asn
>WENV170035605
CDYM01024504
280498
Actinomycetota
GTT
Asn
>WENV170035863
CDYM01036866
280498
Actinomycetota
GTT
Asn
>WENV170035864
CDYM01036866
280498
Actinomycetota
GTT
Asn
>WENV170035865
CDYM01036866
280498
Actinomycetota
GTT
Asn
>WENV170035322
CDYM01011947
56083
Actinomycetota
CGA
Ser
>WENV170035638
CDYM01025818
140768
Actinomycetota
TAG
Leu
>WENV170035670
CDYM01026899
176075
Actinomycetota
TCT
Arg
>WENV170035833
CDYM01034070
176078
Actinomycetota
GGG
Pro
>WENV170035541
CDYM01021748
20208
Actinomycetota
GAG
Leu
>WENV170035123
CDYM01003490
59689
Actinomycetota
GGA
Ser
>WENV170035185
CDYM01006557
175837
Actinomycetota
ACG
Arg
>WENV170035186
CDYM01006557
175837
Actinomycetota
ACG
Arg
>WENV170035263
CDYM01009631
29393
Actinomycetota
GCT
Ser
>WENV170035644
CDYM01025818
280549
Actinomycetota
CAC
Val
>WENV170035869
CDYM01036866
280549
Actinomycetota
CAC
Val
>WENV170035124
CDYM01003490
349164
Actinomycetota
CTC
Glu
>WENV170035556
CDYM01022696
280702
Actinomycetota
GGC
Ala
>WENV170035557
CDYM01022696
280702
Actinomycetota
GGC
Ala
>WENV170035868
CDYM01036866
434162
Actinomycetota
GAC
Val
>WENV170035643
CDYM01025818
434162
Actinomycetota
GAC
Val
>WENV170035691
CDYM01027752
176077
Actinomycetota
CAT
Met
>WENV170035153
CDYM01004834
280524
Actinomycetota
TGC
Ala
>WENV170035623
CDYM01025502
398948
Actinomycetota
TTC
Glu
>WENV170035873
CDYM01036870
150272
Actinomycetota
TAA
Leu
>WENV170035261
CDYM01009631
117777
Actinomycetota
>WENV170035262
CDYM01009631
175949
Actinomycetota
CAT
Met
>WENV170035502
CDYM01020146
191955
Actinomycetota
TGT
Thr
>WENV170035669
CDYM01026899
280544
Actinomycetota
GTG
His
>WENV170035639
CDYM01025818
280496
Actinomycetota
CGT
Thr
>WENV170035692
CDYM01027752
280703
Actinomycetota
CCT
Arg
>WENV170035558
CDYM01022696
184157
Actinomycetota
TGG
Pro
>WENV170035637
CDYM01025818
323758
Actinomycetota
CGT
Thr
>WENV170035641
CDYM01025818
358727
Actinomycetota
CCG
Arg
>WENV170035282
CDYM01010223
99865
Actinomycetota
CAG
Leu
>WENV170035850
CDYM01035587
222475
Actinomycetota
CTT
Lys
>WENV170035125
CDYM01003490
398853
Actinomycetota
CTG
Gln
>WENV170035874
CDYM01036870
175843
Actinomycetota
CAA
Leu
>WENV170035625
CDYM01025502
56075
Actinomycetota
TGA
Ser
>WENV170035152
CDYM01004834
179238
Actinomycetota
GAT
Ile
>WENV170035184
CDYM01006557
506175
Actinomycetota
TTG
Gln
>WENV170035283
CDYM01010223
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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