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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170038634
CDYR01015671
280499
Actinomycetota
CCT
Arg
>WENV170038645
CDYR01016162
104211
Actinomycetota
CAG
Leu
>WENV170038649
CDYR01016421
46642
Actinomycetota
CGA
Ser
>WENV170038672
CDYR01017757
140768
Actinomycetota
TAG
Leu
>WENV170038671
CDYR01017757
280470
Actinomycetota
CGT
Thr
>WENV170038791
CDYR01020351
175882
Actinomycetota
TGG
Pro
>WENV170038793
CDYR01020450
56071
Actinomycetota
TGA
Ser
>WENV170038820
CDYR01021535
20205
Actinomycetota
GCT
Ser
>WENV170038934
CDYR01026615
175837
Actinomycetota
ACG
Arg
>WENV170039023
CDYR01030031
280489
Actinomycetota
CTC
Glu
>WENV170039067
CDYR01031440
280450
Actinomycetota
TTT
Lys
>WENV170039133
CDYR01033476
175843
Actinomycetota
CAA
Leu
>WENV170039164
CDYR01034824
480329
Actinomycetota
CCC
Gly
>WENV170039172
CDYR01035016
179231
Actinomycetota
TAC
Val
>WENV170039315
CDYR01038837
104211
Actinomycetota
CAG
Leu
>WENV170039385
CDYR01041340
175882
Actinomycetota
TGG
Pro
>WENV170039400
CDYR01041792
175841
Actinomycetota
TAT
Ile
>WENV170039503
CDYR01045836
280441
Actinomycetota
CCG
Arg
>WENV170039588
CDYR01048840
117903
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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