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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040188
CDYS01022200
175837
Actinomycetota
ACG
Arg
>WENV170040338
CDYS01028265
175837
Actinomycetota
ACG
Arg
>WENV170040443
CDYS01032244
175843
Actinomycetota
CAA
Leu
>WENV170040742
CDYS01045200
175843
Actinomycetota
CAA
Leu
>WENV170040258
CDYS01024597
280549
Actinomycetota
CAC
Val
>WENV170039721
CDYS01000919
176499
Actinomycetota
CAT
Met
>WENV170040442
CDYS01032126
175949
Actinomycetota
CAT
Met
>WENV170039852
CDYS01006264
317680
Actinomycetota
CCG
Arg
>WENV170040719
CDYS01044050
280499
Actinomycetota
CCT
Arg
>WENV170040043
CDYS01015230
280496
Actinomycetota
CGT
Thr
>WENV170039971
CDYS01012305
280489
Actinomycetota
CTC
Glu
>WENV170039972
CDYS01012305
398853
Actinomycetota
CTG
Gln
>WENV170041009
CDYS01056942
398853
Actinomycetota
CTG
Gln
>WENV170040572
CDYS01037156
20209
Actinomycetota
GAG
Leu
>WENV170039969
CDYS01012062
59689
Actinomycetota
GGA
Ser
>WENV170040478
CDYS01033244
59689
Actinomycetota
GGA
Ser
>WENV170040348
CDYS01029153
117903
Actinomycetota
GTA
Tyr
>WENV170039859
CDYS01006948
175872
Actinomycetota
GTC
Asp
>WENV170040187
CDYS01022194
150272
Actinomycetota
TAA
Leu
>WENV170040052
CDYS01015944
140768
Actinomycetota
TAG
Leu
>WENV170040699
CDYS01042939
203883
Actinomycetota
TCT
Arg
>WENV170041047
CDYS01059106
56071
Actinomycetota
TGA
Ser
>WENV170040257
CDYS01024570
175882
Actinomycetota
TGG
Pro
>WENV170039787
CDYS01003590
280450
Actinomycetota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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