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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170044138
CDYX01000591
99865
Actinomycetota
CAG
Leu
>WENV170044148
CDYX01001000
280441
Actinomycetota
CCG
Arg
>WENV170044218
CDYX01002982
176077
Actinomycetota
CAT
Met
>WENV170044280
CDYX01004418
280549
Actinomycetota
CAC
Val
>WENV170044364
CDYX01005951
291585
Actinomycetota
GCC
Gly
>WENV170044371
CDYX01006163
150272
Actinomycetota
TAA
Leu
>WENV170044372
CDYX01006186
295964
Actinomycetota
GTT
Asn
>WENV170044443
CDYX01007835
398853
Actinomycetota
CTG
Gln
>WENV170044545
CDYX01010515
482604
Actinomycetota
TTG
Gln
>WENV170044559
CDYX01010768
56083
Actinomycetota
CGA
Ser
>WENV170044596
CDYX01012778
56083
Actinomycetota
CGA
Ser
>WENV170044620
CDYX01013541
280498
Actinomycetota
GTT
Asn
>WENV170044630
CDYX01013541
280498
Actinomycetota
GTT
Asn
>WENV170044625
CDYX01013541
176638
Actinomycetota
GGG
Pro
>WENV170044619
CDYX01013541
280523
Actinomycetota
GGC
Ala
>WENV170044629
CDYX01013541
175882
Actinomycetota
TGG
Pro
>WENV170044626
CDYX01013541
20209
Actinomycetota
GAG
Leu
>WENV170044632
CDYX01013541
480319
Actinomycetota
TTG
Gln
>WENV170044628
CDYX01013541
175843
Actinomycetota
CAA
Leu
>WENV170044627
CDYX01013541
147796
Actinomycetota
TAA
Leu
>WENV170044645
CDYX01014163
280702
Actinomycetota
GGC
Ala
>WENV170044658
CDYX01014292
179238
Actinomycetota
GAT
Ile
>WENV170044681
CDYX01015253
20208
Actinomycetota
GAG
Leu
>WENV170044717
CDYX01016909
480376
Actinomycetota
CCC
Gly
>WENV170044765
CDYX01017957
176499
Actinomycetota
CAT
Met
>WENV170044761
CDYX01017957
140768
Actinomycetota
TAG
Leu
>WENV170044754
CDYX01017957
280524
Actinomycetota
TGC
Ala
>WENV170044755
CDYX01017957
280523
Actinomycetota
GGC
Ala
>WENV170044769
CDYX01017957
175841
Actinomycetota
TAT
Ile
>WENV170044747
CDYX01017957
175872
Actinomycetota
GTC
Asp
>WENV170044768
CDYX01017957
175872
Actinomycetota
GTC
Asp
>WENV170044750
CDYX01017957
20205
Actinomycetota
GCT
Ser
>WENV170044751
CDYX01017957
280450
Actinomycetota
TTT
Lys
>WENV170044757
CDYX01017957
480329
Actinomycetota
CCC
Gly
>WENV170044758
CDYX01017957
280489
Actinomycetota
CTC
Glu
>WENV170044759
CDYX01017957
398853
Actinomycetota
CTG
Gln
>WENV170044770
CDYX01017957
203883
Actinomycetota
TCT
Arg
>WENV170044749
CDYX01017957
46642
Actinomycetota
CGA
Ser
>WENV170044752
CDYX01017957
104211
Actinomycetota
CAG
Leu
>WENV170044764
CDYX01017957
117903
Actinomycetota
GTA
Tyr
>WENV170044766
CDYX01017957
56071
Actinomycetota
TGA
Ser
>WENV170044760
CDYX01017957
280470
Actinomycetota
CGT
Thr
>WENV170044818
CDYX01019544
398843
Actinomycetota
GTT
Asn
>WENV170044825
CDYX01020075
280499
Actinomycetota
CCT
Arg
>WENV170044878
CDYX01022204
398948
Actinomycetota
TTC
Glu
>WENV170044882
CDYX01022557
241064
Actinomycetota
CTC
Glu
>WENV170044900
CDYX01023479
280536
Actinomycetota
CTT
Lys
>WENV170044901
CDYX01023479
280536
Actinomycetota
CTT
Lys
>WENV170044928
CDYX01024499
175837
Actinomycetota
ACG
Arg
>WENV170044929
CDYX01024499
175837
Actinomycetota
ACG
Arg
>WENV170044960
CDYX01025569
175926
Actinomycetota
CAT
Met
>WENV170044978
CDYX01026285
175883
Actinomycetota
GAT
Ile
>WENV170044980
CDYX01026285
175883
Actinomycetota
GAT
Ile
>WENV170045036
CDYX01027285
295964
Actinomycetota
GTT
Asn
>WENV170045047
CDYX01027312
280499
Actinomycetota
CCT
Arg
>WENV170045073
CDYX01028042
117777
Actinomycetota
>WENV170045114
CDYX01029572
176075
Actinomycetota
TCT
Arg
>WENV170045116
CDYX01029737
140768
Actinomycetota
TAG
Leu
>WENV170045117
CDYX01029737
280496
Actinomycetota
CGT
Thr
>WENV170045115
CDYX01029737
323758
Actinomycetota
CGT
Thr
>WENV170045133
CDYX01029891
280524
Actinomycetota
TGC
Ala
>WENV170045134
CDYX01029906
191955
Actinomycetota
TGT
Thr
>WENV170045138
CDYX01029944
175843
Actinomycetota
CAA
Leu
>WENV170045152
CDYX01030481
280544
Actinomycetota
GTG
His
>WENV170045193
CDYX01031614
175848
Actinomycetota
TGG
Pro
>WENV170045217
CDYX01032103
56075
Actinomycetota
TGA
Ser
>WENV170045279
CDYX01033862
59689
Actinomycetota
GGA
Ser
>WENV170045282
CDYX01034124
280503
Actinomycetota
CCT
Arg
>WENV170045334
CDYX01035259
241064
Actinomycetota
CTC
Glu
>WENV170045333
CDYX01035259
483206
Actinomycetota
CTG
Gln
>WENV170045335
CDYX01035309
241064
Actinomycetota
CTC
Glu
>WENV170045336
CDYX01035309
241064
Actinomycetota
CTC
Glu
>WENV170045356
CDYX01036597
280441
Actinomycetota
CCG
Arg
>WENV170045399
CDYX01037431
179231
Actinomycetota
TAC
Val
>WENV170045439
CDYX01038746
480319
Actinomycetota
TTG
Gln
>WENV170045467
CDYX01039441
175837
Actinomycetota
ACG
Arg
>WENV170045468
CDYX01039441
175837
Actinomycetota
ACG
Arg
>WENV170045469
CDYX01039441
175837
Actinomycetota
ACG
Arg
>WENV170045475
CDYX01039677
29393
Actinomycetota
GCT
Ser
>WENV170045474
CDYX01039677
175949
Actinomycetota
CAT
Met
>WENV170045565
CDYX01041618
358727
Actinomycetota
CCG
Arg
>WENV170045592
CDYX01042867
222475
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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