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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170078218
CDZV01014408
117777
Actinomycetota
>WENV170078100
CDZV01009742
175837
Actinomycetota
ACG
Arg
>WENV170078878
CDZV01042771
175843
Actinomycetota
CAA
Leu
>WENV170079105
CDZV01051840
99865
Actinomycetota
CAG
Leu
>WENV170078177
CDZV01012502
176077
Actinomycetota
CAT
Met
>WENV170078219
CDZV01014408
175949
Actinomycetota
CAT
Met
>WENV170079005
CDZV01047370
175926
Actinomycetota
CAT
Met
>WENV170077991
CDZV01004542
480376
Actinomycetota
CCC
Gly
>WENV170078944
CDZV01044419
358727
Actinomycetota
CCG
Arg
>WENV170078926
CDZV01044173
56083
Actinomycetota
CGA
Ser
>WENV170078548
CDZV01030061
280496
Actinomycetota
CGT
Thr
>WENV170078539
CDZV01029542
323758
Actinomycetota
CGT
Thr
>WENV170078562
CDZV01030945
349164
Actinomycetota
CTC
Glu
>WENV170078631
CDZV01032925
241064
Actinomycetota
CTC
Glu
>WENV170078875
CDZV01042638
241064
Actinomycetota
CTC
Glu
>WENV170078874
CDZV01042638
483206
Actinomycetota
CTG
Gln
>WENV170078563
CDZV01030945
398853
Actinomycetota
CTG
Gln
>WENV170077897
CDZV01001402
280536
Actinomycetota
CTT
Lys
>WENV170078578
CDZV01031429
222475
Actinomycetota
CTT
Lys
>WENV170078499
CDZV01028152
21508
Actinomycetota
GAG
Leu
>WENV170078575
CDZV01031401
175883
Actinomycetota
GAT
Ile
>WENV170078577
CDZV01031401
175883
Actinomycetota
GAT
Ile
>WENV170078634
CDZV01032999
179238
Actinomycetota
GAT
Ile
>WENV170077942
CDZV01002472
291585
Actinomycetota
GCC
Gly
>WENV170078574
CDZV01031397
291585
Actinomycetota
GCC
Gly
>WENV170078184
CDZV01013038
59689
Actinomycetota
GGA
Ser
>WENV170078480
CDZV01026939
280702
Actinomycetota
GGC
Ala
>WENV170078683
CDZV01035052
280702
Actinomycetota
GGC
Ala
>WENV170078722
CDZV01036129
280544
Actinomycetota
GTG
His
>WENV170078857
CDZV01042287
295964
Actinomycetota
GTT
Asn
>WENV170078345
CDZV01020464
150272
Actinomycetota
TAA
Leu
>WENV170078251
CDZV01015263
175907
Actinomycetota
TAC
Val
>WENV170078540
CDZV01029542
140768
Actinomycetota
TAG
Leu
>WENV170078057
CDZV01007829
176075
Actinomycetota
TCT
Arg
>WENV170079190
CDZV01055421
56075
Actinomycetota
TGA
Ser
>WENV170078635
CDZV01032999
280524
Actinomycetota
TGC
Ala
>WENV170078853
CDZV01042231
191955
Actinomycetota
TGT
Thr
>WENV170078564
CDZV01030981
398948
Actinomycetota
TTC
Glu
>WENV170078112
CDZV01010212
482604
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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