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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170176788
CEOS01123279
177601
Actinomycetota
CAT
Met
>WENV170176305
CEOS01060912
286398
Actinomycetota
GTT
Asn
>WENV170176781
CEOS01122556
414769
Actinomycetota
CCT
Arg
>WENV170176821
CEOS01127651
414769
Actinomycetota
CCT
Arg
>WENV170176526
CEOS01088100
290588
Actinomycetota
CTT
Lys
>WENV170175782
CEOS01007346
180471
Actinomycetota
CAT
Met
>WENV170176096
CEOS01038350
281633
Actinomycetota
CCA
Trp
>WENV170175742
CEOS01003165
292656
Actinomycetota
ACG
Arg
>WENV170176844
CEOS01130663
57196
Actinomycetota
GAG
Leu
>WENV170176200
CEOS01050201
30248
Actinomycetota
CGA
Ser
>WENV170176670
CEOS01108374
30248
Actinomycetota
CGA
Ser
>WENV170176291
CEOS01057741
317626
Actinomycetota
GGC
Ala
>WENV170176318
CEOS01062990
317626
Actinomycetota
GGC
Ala
>WENV170176746
CEOS01118812
317597
Actinomycetota
CTT
Lys
>WENV170175899
CEOS01017705
209512
Actinomycetota
GGG
Pro
>WENV170176336
CEOS01064988
209512
Actinomycetota
GGG
Pro
>WENV170176381
CEOS01070372
75551
Actinomycetota
CAG
Leu
>WENV170177136
CEOS01199971
56361
Actinomycetota
GGA
Ser
>WENV170177177
CEOS01213755
198609
Actinomycetota
TGG
Pro
>WENV170176175
CEOS01048555
118175
Actinomycetota
GTA
Tyr
>WENV170175973
CEOS01024379
179165
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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