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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193229
CEPH01032875
412163
Actinomycetota
TCC
Gly
>WENV170193232
CEPH01033681
401680
Actinomycetota
CTG
Gln
>WENV170193257
CEPH01039981
310739
Actinomycetota
TTT
Lys
>WENV170193269
CEPH01044887
295152
Actinomycetota
GTT
Asn
>WENV170193270
CEPH01044887
148837
Actinomycetota
CAT
Met
>WENV170193301
CEPH01053250
105186
Actinomycetota
TAG
Leu
>WENV170193428
CEPH01080554
16376
Actinomycetota
CGA
Ser
>WENV170193491
CEPH01086732
11546
Actinomycetota
GCT
Ser
>WENV170193492
CEPH01086794
240825
Actinomycetota
GTG
His
>WENV170193617
CEPH01162380
45926
Actinomycetota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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