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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180010229
FLSC01423325
443526
Actinomycetota
CAC
Val
>WENV180009264
FLSC01000251
180071
Actinomycetota
CAT
Met
>WENV180009498
FLSC01006556
180071
Actinomycetota
CAT
Met
>WENV180009950
FLSC01192455
280976
Actinomycetota
CCG
Arg
>WENV180009558
FLSC01013570
285876
Actinomycetota
CGT
Thr
>WENV180009425
FLSC01002853
284889
Actinomycetota
CTC
Glu
>WENV180009495
FLSC01005939
284889
Actinomycetota
CTC
Glu
>WENV180009806
FLSC01093519
284889
Actinomycetota
CTC
Glu
>WENV180009873
FLSC01137533
284889
Actinomycetota
CTC
Glu
>WENV180010375
FLSC01482909
284889
Actinomycetota
CTC
Glu
>WENV180009923
FLSC01167114
284890
Actinomycetota
CTT
Lys
>WENV180010424
FLSC01483054
284890
Actinomycetota
CTT
Lys
>WENV180009716
FLSC01056921
287251
Actinomycetota
CTT
Lys
>WENV180009355
FLSC01001853
47453
Actinomycetota
GAG
Leu
>WENV180009356
FLSC01001853
47453
Actinomycetota
GAG
Leu
>WENV180010113
FLSC01310964
221845
Actinomycetota
GAT
Ile
>WENV180009678
FLSC01044720
284887
Actinomycetota
GCC
Gly
>WENV180010373
FLSC01482909
284887
Actinomycetota
GCC
Gly
>WENV180010387
FLSC01482935
284887
Actinomycetota
GCC
Gly
>WENV180009514
FLSC01008278
371116
Actinomycetota
GGC
Ala
>WENV180009633
FLSC01032374
371116
Actinomycetota
GGC
Ala
>WENV180009536
FLSC01009969
184493
Actinomycetota
GGG
Pro
>WENV180010076
FLSC01277313
402794
Actinomycetota
TCC
Gly
>WENV180009285
FLSC01000441
290430
Actinomycetota
TCT
Arg
>WENV180009935
FLSC01180774
290430
Actinomycetota
TCT
Arg
>WENV180009598
FLSC01023681
184065
Actinomycetota
TGG
Pro
>WENV180009313
FLSC01000790
187640
Actinomycetota
TGT
Thr
>WENV180009828
FLSC01111256
187640
Actinomycetota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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