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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180186013
OAWU01000956
117777
Actinomycetota
>WENV180185973
OAWU01000676
117777
Actinomycetota
>WENV180186290
OAWU01015285
399099
Actinomycetota
>WENV180185923
OAWU01000450
152047
Actinomycetota
ACG
Arg
>WENV180185792
OAWU01000166
175837
Actinomycetota
ACG
Arg
>WENV180186130
OAWU01002200
175837
Actinomycetota
ACG
Arg
>WENV180186131
OAWU01002200
175837
Actinomycetota
ACG
Arg
>WENV180185793
OAWU01000166
178568
Actinomycetota
ACG
Arg
>WENV180185766
OAWU01000132
175843
Actinomycetota
CAA
Leu
>WENV180185684
OAWU01000040
175843
Actinomycetota
CAA
Leu
>WENV180185799
OAWU01000170
280549
Actinomycetota
CAC
Val
>WENV180185851
OAWU01000278
280549
Actinomycetota
CAC
Val
>WENV180185865
OAWU01000309
380862
Actinomycetota
CAC
Val
>WENV180185896
OAWU01000359
380862
Actinomycetota
CAC
Val
>WENV180186180
OAWU01003516
99865
Actinomycetota
CAG
Leu
>WENV180186182
OAWU01003532
99865
Actinomycetota
CAG
Leu
>WENV180186014
OAWU01000956
176499
Actinomycetota
CAT
Met
>WENV180185728
OAWU01000091
176077
Actinomycetota
CAT
Met
>WENV180185974
OAWU01000676
175949
Actinomycetota
CAT
Met
>WENV180186091
OAWU01001601
178569
Actinomycetota
CAT
Met
>WENV180185763
OAWU01000128
480329
Actinomycetota
CCC
Gly
>WENV180185980
OAWU01000703
480376
Actinomycetota
CCC
Gly
>WENV180185848
OAWU01000278
280441
Actinomycetota
CCG
Arg
>WENV180185972
OAWU01000675
283313
Actinomycetota
CCG
Arg
>WENV180185738
OAWU01000094
283311
Actinomycetota
CCT
Arg
>WENV180186115
OAWU01001958
280503
Actinomycetota
CCT
Arg
>WENV180185729
OAWU01000091
280703
Actinomycetota
CCT
Arg
>WENV180186044
OAWU01001143
56083
Actinomycetota
CGA
Ser
>WENV180185812
OAWU01000192
56383
Actinomycetota
CGA
Ser
>WENV180185942
OAWU01000538
280496
Actinomycetota
CGT
Thr
>WENV180185940
OAWU01000538
323758
Actinomycetota
CGT
Thr
>WENV180186095
OAWU01001655
280470
Actinomycetota
CGT
Thr
>WENV180185779
OAWU01000151
349164
Actinomycetota
CTC
Glu
>WENV180185858
OAWU01000283
349164
Actinomycetota
CTC
Glu
>WENV180186198
OAWU01004250
241064
Actinomycetota
CTC
Glu
>WENV180185780
OAWU01000151
398853
Actinomycetota
CTG
Gln
>WENV180185859
OAWU01000283
398853
Actinomycetota
CTG
Gln
>WENV180186263
OAWU01009859
284890
Actinomycetota
CTT
Lys
>WENV180186291
OAWU01015400
280982
Actinomycetota
CTT
Lys
>WENV180186191
OAWU01003934
280536
Actinomycetota
CTT
Lys
>WENV180186192
OAWU01003934
280536
Actinomycetota
CTT
Lys
>WENV180185892
OAWU01000352
222475
Actinomycetota
CTT
Lys
>WENV180185946
OAWU01000555
222475
Actinomycetota
CTT
Lys
>WENV180185798
OAWU01000170
468141
Actinomycetota
GAC
Val
>WENV180185850
OAWU01000278
468141
Actinomycetota
GAC
Val
>WENV180185794
OAWU01000167
21508
Actinomycetota
GAG
Leu
>WENV180185713
OAWU01000065
20415
Actinomycetota
GAG
Leu
>WENV180186218
OAWU01005996
175883
Actinomycetota
GAT
Ile
>WENV180185944
OAWU01000550
179238
Actinomycetota
GAT
Ile
>WENV180186227
OAWU01006505
291585
Actinomycetota
GCC
Gly
>WENV180185975
OAWU01000676
29393
Actinomycetota
GCT
Ser
>WENV180185811
OAWU01000192
24925
Actinomycetota
GCT
Ser
>WENV180185778
OAWU01000151
59689
Actinomycetota
GGA
Ser
>WENV180185857
OAWU01000283
59689
Actinomycetota
GGA
Ser
>WENV180186032
OAWU01001095
280702
Actinomycetota
GGC
Ala
>WENV180186033
OAWU01001095
280702
Actinomycetota
GGC
Ala
>WENV180185866
OAWU01000309
280523
Actinomycetota
GGC
Ala
>WENV180186081
OAWU01001502
280523
Actinomycetota
GGC
Ala
>WENV180185939
OAWU01000528
176078
Actinomycetota
GGG
Pro
>WENV180186086
OAWU01001545
176078
Actinomycetota
GGG
Pro
>WENV180185740
OAWU01000099
283312
Actinomycetota
GTG
His
>WENV180185831
OAWU01000238
280544
Actinomycetota
GTG
His
>WENV180186005
OAWU01000910
280498
Actinomycetota
GTT
Asn
>WENV180185901
OAWU01000393
295964
Actinomycetota
GTT
Asn
>WENV180186003
OAWU01000910
295964
Actinomycetota
GTT
Asn
>WENV180186004
OAWU01000910
295964
Actinomycetota
GTT
Asn
>WENV180186178
OAWU01003477
398843
Actinomycetota
GTT
Asn
>WENV180185683
OAWU01000040
150272
Actinomycetota
TAA
Leu
>WENV180185867
OAWU01000310
175907
Actinomycetota
TAC
Val
>WENV180185910
OAWU01000435
227544
Actinomycetota
TAC
Val
>WENV180185941
OAWU01000538
140768
Actinomycetota
TAG
Leu
>WENV180186096
OAWU01001655
140879
Actinomycetota
TAG
Leu
>WENV180185947
OAWU01000563
176075
Actinomycetota
TCT
Arg
>WENV180185991
OAWU01000803
176075
Actinomycetota
TCT
Arg
>WENV180185813
OAWU01000195
56384
Actinomycetota
TGA
Ser
>WENV180185992
OAWU01000817
56075
Actinomycetota
TGA
Ser
>WENV180185719
OAWU01000076
280524
Actinomycetota
TGC
Ala
>WENV180185945
OAWU01000550
280524
Actinomycetota
TGC
Ala
>WENV180185682
OAWU01000040
184157
Actinomycetota
TGG
Pro
>WENV180186163
OAWU01003001
191955
Actinomycetota
TGT
Thr
>WENV180185751
OAWU01000116
398948
Actinomycetota
TTC
Glu
>WENV180185874
OAWU01000323
398948
Actinomycetota
TTC
Glu
>WENV180185927
OAWU01000450
480374
Actinomycetota
TTG
Gln
>WENV180185948
OAWU01000572
506175
Actinomycetota
TTG
Gln
>WENV180186057
OAWU01001235
506175
Actinomycetota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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