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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180314289
OBKG01000574
313386
Actinomycetota
CGT
Thr
>WENV180314290
OBKG01000574
113601
Actinomycetota
TAG
Leu
>WENV180314293
OBKG01000625
44855
Actinomycetota
TGA
Ser
>WENV180314297
OBKG01000692
413665
Actinomycetota
TTG
Gln
>WENV180314303
OBKG01000814
144823
Actinomycetota
TCT
Arg
>WENV180314310
OBKG01000883
411601
Actinomycetota
CCC
Gly
>WENV180314312
OBKG01000887
144825
Actinomycetota
CAT
Met
>WENV180314315
OBKG01000931
44862
Actinomycetota
CGA
Ser
>WENV180314317
OBKG01000954
53078
Actinomycetota
GGA
Ser
>WENV180314322
OBKG01000994
235146
Actinomycetota
CGT
Thr
>WENV180314337
OBKG01001256
144595
Actinomycetota
CAA
Leu
>WENV180314338
OBKG01001269
144660
Actinomycetota
TAC
Val
>WENV180314340
OBKG01001282
174149
Actinomycetota
GAT
Ile
>WENV180314341
OBKG01001282
235174
Actinomycetota
TGC
Ala
>WENV180314356
OBKG01001380
144595
Actinomycetota
CAA
Leu
>WENV180314359
OBKG01001428
158720
Actinomycetota
ACG
Arg
>WENV180314383
OBKG01001830
119508
Actinomycetota
TAA
Leu
>WENV180314387
OBKG01001898
53078
Actinomycetota
GGA
Ser
>WENV180314399
OBKG01002032
23370
Actinomycetota
GCT
Ser
>WENV180314415
OBKG01002254
144823
Actinomycetota
TCT
Arg
>WENV180314418
OBKG01002350
17009
Actinomycetota
GAG
Leu
>WENV180314421
OBKG01002369
121510
Actinomycetota
TAA
Leu
>WENV180314422
OBKG01002378
235148
Actinomycetota
GTT
Asn
>WENV180314439
OBKG01002516
338239
Actinomycetota
TTC
Glu
>WENV180314441
OBKG01002547
80622
Actinomycetota
CAG
Leu
>WENV180314445
OBKG01002649
45852
Actinomycetota
CGA
Ser
>WENV180314450
OBKG01002753
235148
Actinomycetota
GTT
Asn
>WENV180314467
OBKG01003370
235194
Actinomycetota
GTG
His
>WENV180314480
OBKG01003687
17009
Actinomycetota
GAG
Leu
>WENV180314500
OBKG01004058
45154
Actinomycetota
TGA
Ser
>WENV180314509
OBKG01004285
235347
Actinomycetota
GGC
Ala
>WENV180314534
OBKG01005156
144825
Actinomycetota
CAT
Met
>WENV180314537
OBKG01005434
201717
Actinomycetota
CTT
Lys
>WENV180314559
OBKG01006531
145345
Actinomycetota
TAC
Val
>WENV180314581
OBKG01009377
144600
Actinomycetota
TGG
Pro
>WENV180314586
OBKG01010023
243162
Actinomycetota
GTT
Asn
>WENV180314605
OBKG01012159
235148
Actinomycetota
GTT
Asn
>WENV180314606
OBKG01012159
243162
Actinomycetota
GTT
Asn
>WENV180314750
OBKG01043906
95593
Actinomycetota
>WENV180314751
OBKG01043906
144700
Actinomycetota
CAT
Met
>WENV180314796
OBKG01066804
356045
Actinomycetota
GAC
Val
>WENV180314797
OBKG01066804
235199
Actinomycetota
CAC
Val
>WENV180314850
OBKG01111809
254857
Actinomycetota
CCG
Arg
>WENV180314883
OBKG01130277
295695
Actinomycetota
CTC
Glu
>WENV180314896
OBKG01131175
144826
Actinomycetota
GGG
Pro
>WENV180314897
OBKG01131303
23370
Actinomycetota
GCT
Ser
>WENV180314898
OBKG01131318
235348
Actinomycetota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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