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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181104457
OEDX01000046
235146
Actinomycetota
CGT
Thr
>WENV181104461
OEDX01000052
235347
Actinomycetota
GGC
Ala
>WENV181104458
OEDX01000048
201717
Actinomycetota
CTT
Lys
>WENV181104425
OEDX01000003
235194
Actinomycetota
GTG
His
>WENV181104432
OEDX01000011
158720
Actinomycetota
ACG
Arg
>WENV181104433
OEDX01000011
158720
Actinomycetota
ACG
Arg
>WENV181104435
OEDX01000013
411601
Actinomycetota
CCC
Gly
>WENV181104453
OEDX01000033
144826
Actinomycetota
GGG
Pro
>WENV181104444
OEDX01000024
23370
Actinomycetota
GCT
Ser
>WENV181104468
OEDX01000127
174149
Actinomycetota
GAT
Ile
>WENV181104446
OEDX01000029
338239
Actinomycetota
TTC
Glu
>WENV181104469
OEDX01000127
235174
Actinomycetota
TGC
Ala
>WENV181104441
OEDX01000023
235101
Actinomycetota
TTT
Lys
>WENV181104437
OEDX01000020
121510
Actinomycetota
TAA
Leu
>WENV181104450
OEDX01000032
356045
Actinomycetota
GAC
Val
>WENV181104451
OEDX01000032
235199
Actinomycetota
CAC
Val
>WENV181104467
OEDX01000120
44862
Actinomycetota
CGA
Ser
>WENV181104455
OEDX01000046
313386
Actinomycetota
CGT
Thr
>WENV181104460
OEDX01000051
367535
Actinomycetota
CTG
Gln
>WENV181104463
OEDX01000069
413665
Actinomycetota
TTG
Gln
>WENV181104427
OEDX01000007
45154
Actinomycetota
TGA
Ser
>WENV181104439
OEDX01000021
254857
Actinomycetota
CCG
Arg
>WENV181104443
OEDX01000024
144700
Actinomycetota
CAT
Met
>WENV181104459
OEDX01000051
295695
Actinomycetota
CTC
Glu
>WENV181104436
OEDX01000016
235148
Actinomycetota
GTT
Asn
>WENV181104440
OEDX01000023
53078
Actinomycetota
GGA
Ser
>WENV181104431
OEDX01000010
144825
Actinomycetota
CAT
Met
>WENV181104426
OEDX01000004
235348
Actinomycetota
CCT
Arg
>WENV181104456
OEDX01000046
113601
Actinomycetota
TAG
Leu
>WENV181104447
OEDX01000030
144595
Actinomycetota
CAA
Leu
>WENV181104462
OEDX01000052
163764
Actinomycetota
TGG
Pro
>WENV181104429
OEDX01000009
17009
Actinomycetota
GAG
Leu
>WENV181104434
OEDX01000013
80622
Actinomycetota
CAG
Leu
>WENV181104466
OEDX01000119
243162
Actinomycetota
GTT
Asn
>WENV181104454
OEDX01000039
144660
Actinomycetota
TAC
Val
>WENV181104442
OEDX01000024
95593
Actinomycetota
>WENV181104464
OEDX01000074
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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