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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182241719
OHSG01000591
280450
Actinomycetota
TTT
Lys
>WENV182241913
OHSG01003829
203883
Actinomycetota
TCT
Arg
>WENV182242017
OHSG01008427
280441
Actinomycetota
CCG
Arg
>WENV182242025
OHSG01008575
280524
Actinomycetota
TGC
Ala
>WENV182242041
OHSG01009370
480329
Actinomycetota
CCC
Gly
>WENV182242057
OHSG01009901
117903
Actinomycetota
GTA
Tyr
>WENV182242058
OHSG01009901
176499
Actinomycetota
CAT
Met
>WENV182242110
OHSG01013182
176638
Actinomycetota
GGG
Pro
>WENV182242148
OHSG01016836
179231
Actinomycetota
TAC
Val
>WENV182242180
OHSG01019624
280536
Actinomycetota
CTT
Lys
>WENV182242209
OHSG01023487
280523
Actinomycetota
GGC
Ala
>WENV182242213
OHSG01023777
175882
Actinomycetota
TGG
Pro
>WENV182242218
OHSG01023868
280489
Actinomycetota
CTC
Glu
>WENV182242219
OHSG01023868
398853
Actinomycetota
CTG
Gln
>WENV182242278
OHSG01032921
280498
Actinomycetota
GTT
Asn
>WENV182242311
OHSG01040984
280499
Actinomycetota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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