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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182367980
OICM01001970
176499
Actinomycetota
CAT
Met
>WENV182367885
OICM01000629
280498
Actinomycetota
GTT
Asn
>WENV182367886
OICM01000629
280498
Actinomycetota
GTT
Asn
>WENV182368034
OICM01003682
280503
Actinomycetota
CCT
Arg
>WENV182367953
OICM01001608
140768
Actinomycetota
TAG
Leu
>WENV182368009
OICM01002543
187349
Actinomycetota
TGG
Pro
>WENV182368097
OICM01006218
280441
Actinomycetota
CCG
Arg
>WENV182367963
OICM01001665
280524
Actinomycetota
TGC
Ala
>WENV182367964
OICM01001665
280523
Actinomycetota
GGC
Ala
>WENV182368232
OICM01025305
175841
Actinomycetota
TAT
Ile
>WENV182368243
OICM01030934
280536
Actinomycetota
CTT
Lys
>WENV182368068
OICM01004886
175872
Actinomycetota
GTC
Asp
>WENV182368207
OICM01017415
280450
Actinomycetota
TTT
Lys
>WENV182368118
OICM01007427
480329
Actinomycetota
CCC
Gly
>WENV182368064
OICM01004746
20209
Actinomycetota
GAG
Leu
>WENV182367925
OICM01001158
99865
Actinomycetota
CAG
Leu
>WENV182367922
OICM01001140
280489
Actinomycetota
CTC
Glu
>WENV182367985
OICM01002058
280499
Actinomycetota
CCT
Arg
>WENV182367923
OICM01001140
398853
Actinomycetota
CTG
Gln
>WENV182367937
OICM01001324
175843
Actinomycetota
CAA
Leu
>WENV182368004
OICM01002434
46642
Actinomycetota
CGA
Ser
>WENV182367979
OICM01001970
117903
Actinomycetota
GTA
Tyr
>WENV182368103
OICM01006532
56071
Actinomycetota
TGA
Ser
>WENV182367952
OICM01001608
280470
Actinomycetota
CGT
Thr
>WENV182368090
OICM01005795
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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