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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182398031
OIEN01000270
59689
Actinomycetota
GGA
Ser
>WENV182398260
OIEN01000964
175872
Actinomycetota
GTC
Asp
>WENV182398262
OIEN01000964
175872
Actinomycetota
GTC
Asp
>WENV182398265
OIEN01000989
280450
Actinomycetota
TTT
Lys
>WENV182398278
OIEN01001038
280524
Actinomycetota
TGC
Ala
>WENV182398338
OIEN01001422
176638
Actinomycetota
GGG
Pro
>WENV182398340
OIEN01001437
175841
Actinomycetota
TAT
Ile
>WENV182398380
OIEN01001709
280498
Actinomycetota
GTT
Asn
>WENV182398381
OIEN01001709
280498
Actinomycetota
GTT
Asn
>WENV182398410
OIEN01001970
280499
Actinomycetota
CCT
Arg
>WENV182398422
OIEN01002082
175882
Actinomycetota
TGG
Pro
>WENV182398440
OIEN01002267
147796
Actinomycetota
TAA
Leu
>WENV182398466
OIEN01002470
280523
Actinomycetota
GGC
Ala
>WENV182398471
OIEN01002484
20205
Actinomycetota
GCT
Ser
>WENV182398489
OIEN01002626
46642
Actinomycetota
CGA
Ser
>WENV182398490
OIEN01002646
280489
Actinomycetota
CTC
Glu
>WENV182398491
OIEN01002646
398853
Actinomycetota
CTG
Gln
>WENV182398520
OIEN01002991
480319
Actinomycetota
TTG
Gln
>WENV182398526
OIEN01003089
191955
Actinomycetota
TGT
Thr
>WENV182398528
OIEN01003100
140768
Actinomycetota
TAG
Leu
>WENV182398527
OIEN01003100
280470
Actinomycetota
CGT
Thr
>WENV182398557
OIEN01003416
480329
Actinomycetota
CCC
Gly
>WENV182398583
OIEN01003908
175843
Actinomycetota
CAA
Leu
>WENV182398587
OIEN01004059
176499
Actinomycetota
CAT
Met
>WENV182398586
OIEN01004059
117903
Actinomycetota
GTA
Tyr
>WENV182398657
OIEN01005378
203883
Actinomycetota
TCT
Arg
>WENV182398698
OIEN01006596
179231
Actinomycetota
TAC
Val
>WENV182398706
OIEN01007016
176075
Actinomycetota
TCT
Arg
>WENV182398734
OIEN01007917
280496
Actinomycetota
CGT
Thr
>WENV182398790
OIEN01009847
280703
Actinomycetota
CCT
Arg
>WENV182398830
OIEN01011379
480376
Actinomycetota
CCC
Gly
>WENV182398832
OIEN01011419
56083
Actinomycetota
CGA
Ser
>WENV182398853
OIEN01012177
175837
Actinomycetota
ACG
Arg
>WENV182398883
OIEN01013304
56071
Actinomycetota
TGA
Ser
>WENV182398953
OIEN01016416
280441
Actinomycetota
CCG
Arg
>WENV182398977
OIEN01018353
175848
Actinomycetota
TGG
Pro
>WENV182399197
OIEN01037833
175883
Actinomycetota
GAT
Ile
>WENV182399253
OIEN01044321
56075
Actinomycetota
TGA
Ser
>WENV182399274
OIEN01047020
20209
Actinomycetota
GAG
Leu
>WENV182399289
OIEN01049195
175907
Actinomycetota
TAC
Val
>WENV182399297
OIEN01049843
291585
Actinomycetota
GCC
Gly
>WENV182399478
OIEN01080233
280549
Actinomycetota
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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