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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182509642
OIWK01000003
338148
Actinomycetota
CTG
Gln
>WENV182509644
OIWK01000003
113601
Actinomycetota
TAG
Leu
>WENV182509643
OIWK01000003
235121
Actinomycetota
CGT
Thr
>WENV182509687
OIWK01000013
37070
Actinomycetota
CGA
Ser
>WENV182509688
OIWK01000013
16219
Actinomycetota
GCT
Ser
>WENV182509685
OIWK01000013
144625
Actinomycetota
GTC
Asp
>WENV182509684
OIWK01000013
144625
Actinomycetota
GTC
Asp
>WENV182509682
OIWK01000013
44851
Actinomycetota
TGA
Ser
>WENV182509689
OIWK01000014
144589
Actinomycetota
ACG
Arg
>WENV182509690
OIWK01000014
278447
Actinomycetota
GTG
His
>WENV182509749
OIWK01000052
16223
Actinomycetota
GAG
Leu
>WENV182509752
OIWK01000055
235092
Actinomycetota
CCG
Arg
>WENV182509762
OIWK01000065
158513
Actinomycetota
TGG
Pro
>WENV182509780
OIWK01000073
119475
Actinomycetota
TAA
Leu
>WENV182509781
OIWK01000073
144595
Actinomycetota
CAA
Leu
>WENV182509782
OIWK01000073
144635
Actinomycetota
TGG
Pro
>WENV182509794
OIWK01000091
235148
Actinomycetota
GTT
Asn
>WENV182509793
OIWK01000091
145343
Actinomycetota
GGG
Pro
>WENV182509802
OIWK01000101
61501
Actinomycetota
CAG
Leu
>WENV182509816
OIWK01000119
235174
Actinomycetota
TGC
Ala
>WENV182509817
OIWK01000119
235173
Actinomycetota
GGC
Ala
>WENV182509843
OIWK01000187
144636
Actinomycetota
GAT
Ile
>WENV182509869
OIWK01000227
144593
Actinomycetota
TAT
Ile
>WENV182509892
OIWK01000254
235148
Actinomycetota
GTT
Asn
>WENV182509889
OIWK01000254
176456
Actinomycetota
TCT
Arg
>WENV182509891
OIWK01000254
235173
Actinomycetota
GGC
Ala
>WENV182509976
OIWK01000390
411554
Actinomycetota
CCC
Gly
>WENV182509975
OIWK01000390
80622
Actinomycetota
CAG
Leu
>WENV182509987
OIWK01000410
245301
Actinomycetota
GCC
Gly
>WENV182510058
OIWK01000559
338139
Actinomycetota
GTT
Asn
>WENV182510067
OIWK01000574
98279
Actinomycetota
GTA
Tyr
>WENV182510083
OIWK01000630
235149
Actinomycetota
CCT
Arg
>WENV182510136
OIWK01000804
414234
Actinomycetota
CTG
Gln
>WENV182510256
OIWK01001150
198659
Actinomycetota
TAC
Val
>WENV182510346
OIWK01001556
153948
Actinomycetota
GGG
Pro
>WENV182510825
OIWK01006483
235101
Actinomycetota
TTT
Lys
>WENV182511316
OIWK01046922
382278
Actinomycetota
GAC
Val
>WENV182511330
OIWK01050158
241401
Actinomycetota
CCA
Trp
>WENV182511369
OIWK01059044
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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