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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182859970
OKOQ01000533
175907
Actinomycetota
TAC
Val
>WENV182859906
OKOQ01000175
280498
Actinomycetota
GTT
Asn
>WENV182859919
OKOQ01000218
56083
Actinomycetota
CGA
Ser
>WENV182859903
OKOQ01000152
140768
Actinomycetota
TAG
Leu
>WENV182859931
OKOQ01000266
176075
Actinomycetota
TCT
Arg
>WENV182859891
OKOQ01000124
176078
Actinomycetota
GGG
Pro
>WENV182859933
OKOQ01000290
20208
Actinomycetota
GAG
Leu
>WENV182859932
OKOQ01000282
482604
Actinomycetota
TTG
Gln
>WENV182859938
OKOQ01000316
152047
Actinomycetota
ACG
Arg
>WENV182859900
OKOQ01000140
59689
Actinomycetota
GGA
Ser
>WENV182859880
OKOQ01000084
175837
Actinomycetota
ACG
Arg
>WENV182859921
OKOQ01000246
29393
Actinomycetota
GCT
Ser
>WENV182859964
OKOQ01000415
280549
Actinomycetota
CAC
Val
>WENV182859898
OKOQ01000140
349164
Actinomycetota
CTC
Glu
>WENV182859967
OKOQ01000459
280702
Actinomycetota
GGC
Ala
>WENV182859963
OKOQ01000415
434162
Actinomycetota
GAC
Val
>WENV182859890
OKOQ01000122
176077
Actinomycetota
CAT
Met
>WENV182859877
OKOQ01000054
280524
Actinomycetota
TGC
Ala
>WENV182859918
OKOQ01000209
398948
Actinomycetota
TTC
Glu
>WENV182859901
OKOQ01000143
150272
Actinomycetota
TAA
Leu
>WENV182859929
OKOQ01000262
117777
Actinomycetota
>WENV182859930
OKOQ01000262
175949
Actinomycetota
CAT
Met
>WENV182859957
OKOQ01000358
191955
Actinomycetota
TGT
Thr
>WENV182859907
OKOQ01000177
280544
Actinomycetota
GTG
His
>WENV182859904
OKOQ01000152
280496
Actinomycetota
CGT
Thr
>WENV182859879
OKOQ01000068
280703
Actinomycetota
CCT
Arg
>WENV182859980
OKOQ01000644
184157
Actinomycetota
TGG
Pro
>WENV182859902
OKOQ01000152
323758
Actinomycetota
CGT
Thr
>WENV182859968
OKOQ01000470
358727
Actinomycetota
CCG
Arg
>WENV182859896
OKOQ01000134
99865
Actinomycetota
CAG
Leu
>WENV182859905
OKOQ01000154
222475
Actinomycetota
CTT
Lys
>WENV182859899
OKOQ01000140
398853
Actinomycetota
CTG
Gln
>WENV182859916
OKOQ01000202
175843
Actinomycetota
CAA
Leu
>WENV182859897
OKOQ01000135
56075
Actinomycetota
TGA
Ser
>WENV182859876
OKOQ01000054
179238
Actinomycetota
GAT
Ile
>WENV182859926
OKOQ01000254
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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