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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182943151
OKVH01032871
176499
Actinomycetota
CAT
Met
>WENV182942253
OKVH01000213
175883
Actinomycetota
GAT
Ile
>WENV182942552
OKVH01001552
285746
Actinomycetota
GGC
Ala
>WENV182943222
OKVH01043944
280498
Actinomycetota
GTT
Asn
>WENV182943223
OKVH01043944
280498
Actinomycetota
GTT
Asn
>WENV182942482
OKVH01000946
280503
Actinomycetota
CCT
Arg
>WENV182943152
OKVH01033141
59689
Actinomycetota
GGA
Ser
>WENV182942949
OKVH01011651
398843
Actinomycetota
GTT
Asn
>WENV182943243
OKVH01050906
280524
Actinomycetota
TGC
Ala
>WENV182942250
OKVH01000210
481719
Actinomycetota
GCA
Cys
>WENV182942249
OKVH01000210
291585
Actinomycetota
GCC
Gly
>WENV182943244
OKVH01050906
280523
Actinomycetota
GGC
Ala
>WENV182942608
OKVH01002052
280536
Actinomycetota
CTT
Lys
>WENV182943143
OKVH01031972
20205
Actinomycetota
GCT
Ser
>WENV182942551
OKVH01001531
175926
Actinomycetota
CAT
Met
>WENV182943073
OKVH01021405
280450
Actinomycetota
TTT
Lys
>WENV182943254
OKVH01052016
480329
Actinomycetota
CCC
Gly
>WENV182942572
OKVH01001748
483206
Actinomycetota
CTG
Gln
>WENV182943217
OKVH01042705
280489
Actinomycetota
CTC
Glu
>WENV182943218
OKVH01042705
398853
Actinomycetota
CTG
Gln
>WENV182943251
OKVH01051770
46642
Actinomycetota
CGA
Ser
>WENV182942954
OKVH01011955
104211
Actinomycetota
CAG
Leu
>WENV182943150
OKVH01032871
117903
Actinomycetota
GTA
Tyr
>WENV182943097
OKVH01023676
56071
Actinomycetota
TGA
Ser
>WENV182942713
OKVH01003808
176162
Actinomycetota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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