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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183090423
OLKA01000002
3983
Actinomycetota
GCT
Ser
>WENV183090424
OLKA01000002
398947
Actinomycetota
CCA
Trp
>WENV183090426
OLKA01000003
176077
Actinomycetota
CAT
Met
>WENV183090427
OLKA01000003
280703
Actinomycetota
CCT
Arg
>WENV183090430
OLKA01000010
481233
Actinomycetota
CCC
Gly
>WENV183090431
OLKA01000010
99865
Actinomycetota
CAG
Leu
>WENV183090432
OLKA01000011
176075
Actinomycetota
TCT
Arg
>WENV183090433
OLKA01000014
280498
Actinomycetota
GTT
Asn
>WENV183090434
OLKA01000014
295964
Actinomycetota
GTT
Asn
>WENV183090435
OLKA01000015
59689
Actinomycetota
GGA
Ser
>WENV183090436
OLKA01000015
280450
Actinomycetota
TTT
Lys
>WENV183090437
OLKA01000017
222475
Actinomycetota
CTT
Lys
>WENV183090438
OLKA01000021
323758
Actinomycetota
CGT
Thr
>WENV183090439
OLKA01000021
140768
Actinomycetota
TAG
Leu
>WENV183090440
OLKA01000023
191955
Actinomycetota
TGT
Thr
>WENV183090448
OLKA01000032
20450
Actinomycetota
GAG
Leu
>WENV183090450
OLKA01000039
56451
Actinomycetota
CGA
Ser
>WENV183090451
OLKA01000039
60767
Actinomycetota
TGA
Ser
>WENV183090465
OLKA01000063
175843
Actinomycetota
CAA
Leu
>WENV183090466
OLKA01000063
175848
Actinomycetota
TGG
Pro
>WENV183090467
OLKA01000064
280702
Actinomycetota
GGC
Ala
>WENV183090468
OLKA01000064
506175
Actinomycetota
TTG
Gln
>WENV183090473
OLKA01000088
358727
Actinomycetota
CCG
Arg
>WENV183090476
OLKA01000095
468141
Actinomycetota
GAC
Val
>WENV183090477
OLKA01000095
280549
Actinomycetota
CAC
Val
>WENV183090480
OLKA01000109
349164
Actinomycetota
CTC
Glu
>WENV183090481
OLKA01000109
430848
Actinomycetota
CTG
Gln
>WENV183090492
OLKA01000187
280544
Actinomycetota
GTG
His
>WENV183090496
OLKA01000225
227544
Actinomycetota
TAC
Val
>WENV183090499
OLKA01000249
117777
Actinomycetota
>WENV183090500
OLKA01000249
175949
Actinomycetota
CAT
Met
>WENV183090502
OLKA01000262
398948
Actinomycetota
TTC
Glu
>WENV183090504
OLKA01000292
29393
Actinomycetota
GCT
Ser
>WENV183090508
OLKA01000409
175837
Actinomycetota
ACG
Arg
>WENV183090510
OLKA01000419
176078
Actinomycetota
GGG
Pro
>WENV183090516
OLKA01000507
150272
Actinomycetota
TAA
Leu
>WENV183090523
OLKA01000548
179238
Actinomycetota
GAT
Ile
>WENV183090524
OLKA01000548
280524
Actinomycetota
TGC
Ala
>WENV183090546
OLKA01002026
482602
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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