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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183277041
OLSA01000012
179231
Actinomycetota
TAC
Val
>WENV183277045
OLSA01000015
175882
Actinomycetota
TGG
Pro
>WENV183277044
OLSA01000015
175843
Actinomycetota
CAA
Leu
>WENV183277043
OLSA01000015
147796
Actinomycetota
TAA
Leu
>WENV183277173
OLSA01000135
280499
Actinomycetota
CCT
Arg
>WENV183277177
OLSA01000141
176638
Actinomycetota
GGG
Pro
>WENV183277271
OLSA01000333
459899
Actinomycetota
TTC
Glu
>WENV183277270
OLSA01000333
175872
Actinomycetota
GTC
Asp
>WENV183277291
OLSA01000378
280450
Actinomycetota
TTT
Lys
>WENV183277324
OLSA01000465
20205
Actinomycetota
GCT
Ser
>WENV183277329
OLSA01000486
480329
Actinomycetota
CCC
Gly
>WENV183277328
OLSA01000486
104211
Actinomycetota
CAG
Leu
>WENV183277343
OLSA01000524
140768
Actinomycetota
TAG
Leu
>WENV183277342
OLSA01000524
280470
Actinomycetota
CGT
Thr
>WENV183277357
OLSA01000575
280498
Actinomycetota
GTT
Asn
>WENV183277453
OLSA01000961
280498
Actinomycetota
GTT
Asn
>WENV183277549
OLSA01001371
175841
Actinomycetota
TAT
Ile
>WENV183277564
OLSA01001440
480319
Actinomycetota
TTG
Gln
>WENV183277600
OLSA01001591
176499
Actinomycetota
CAT
Met
>WENV183277599
OLSA01001591
117903
Actinomycetota
GTA
Tyr
>WENV183277618
OLSA01001740
280441
Actinomycetota
CCG
Arg
>WENV183277673
OLSA01002126
46642
Actinomycetota
CGA
Ser
>WENV183277696
OLSA01002304
191955
Actinomycetota
TGT
Thr
>WENV183277716
OLSA01002459
29393
Actinomycetota
GCT
Ser
>WENV183277750
OLSA01002691
280524
Actinomycetota
TGC
Ala
>WENV183277751
OLSA01002691
280523
Actinomycetota
GGC
Ala
>WENV183277809
OLSA01003078
59689
Actinomycetota
GGA
Ser
>WENV183277888
OLSA01003730
56083
Actinomycetota
CGA
Ser
>WENV183277930
OLSA01003961
176075
Actinomycetota
TCT
Arg
>WENV183277974
OLSA01004563
280503
Actinomycetota
CCT
Arg
>WENV183277981
OLSA01004683
150272
Actinomycetota
TAA
Leu
>WENV183278063
OLSA01006136
56071
Actinomycetota
TGA
Ser
>WENV183278103
OLSA01006812
280523
Actinomycetota
GGC
Ala
>WENV183278124
OLSA01007199
280549
Actinomycetota
CAC
Val
>WENV183278133
OLSA01007407
140768
Actinomycetota
TAG
Leu
>WENV183278132
OLSA01007407
323758
Actinomycetota
CGT
Thr
>WENV183278316
OLSA01011826
180826
Actinomycetota
GGG
Pro
>WENV183278383
OLSA01014130
56075
Actinomycetota
TGA
Ser
>WENV183278406
OLSA01015300
241064
Actinomycetota
CTC
Glu
>WENV183278405
OLSA01015300
483206
Actinomycetota
CTG
Gln
>WENV183278436
OLSA01016850
280703
Actinomycetota
CCT
Arg
>WENV183278449
OLSA01017623
480376
Actinomycetota
CCC
Gly
>WENV183278463
OLSA01018680
175926
Actinomycetota
CAT
Met
>WENV183278536
OLSA01022294
358727
Actinomycetota
CCG
Arg
>WENV183278542
OLSA01022619
291585
Actinomycetota
GCC
Gly
>WENV183278564
OLSA01024532
176077
Actinomycetota
CAT
Met
>WENV183278729
OLSA01040211
398843
Actinomycetota
GTT
Asn
>WENV183278837
OLSA01058585
280489
Actinomycetota
CTC
Glu
>WENV183278838
OLSA01058585
398853
Actinomycetota
CTG
Gln
>WENV183278867
OLSA01064602
280496
Actinomycetota
CGT
Thr
>WENV183278869
OLSA01065125
481719
Actinomycetota
GCA
Cys
>WENV183278923
OLSA01084696
14009
Actinomycetota
GGA
Ser
>WENV183278948
OLSA01091491
298224
Actinomycetota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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