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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725906
PJQF01034888
243300
Actinomycetota
CAC
Val
>WENV183725706
PJQF01009433
237508
Actinomycetota
TTT
Lys
>WENV183726521
PJQF01236034
95968
Actinomycetota
TAG
Leu
>WENV183726494
PJQF01223569
155720
Actinomycetota
GGG
Pro
>WENV183725891
PJQF01031704
411983
Actinomycetota
TCC
Gly
>WENV183726483
PJQF01218754
153188
Actinomycetota
CAT
Met
>WENV183726076
PJQF01075597
16376
Actinomycetota
CGA
Ser
>WENV183725782
PJQF01016043
248046
Actinomycetota
CCA
Trp
>WENV183725669
PJQF01006282
237593
Actinomycetota
GTT
Asn
>WENV183726435
PJQF01198180
152216
Actinomycetota
GAT
Ile
>WENV183726088
PJQF01078550
44898
Actinomycetota
GGA
Ser
>WENV183725850
PJQF01025357
342999
Actinomycetota
GGT
Thr
>WENV183725774
PJQF01014873
244227
Actinomycetota
CGT
Thr
>WENV183725851
PJQF01025357
146888
Actinomycetota
CAT
Met
>WENV183725648
PJQF01004832
152456
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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