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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170129324
CENQ01083557
360947
Alphaproteobacteria
TTT
Lys
>WENV170129385
CENQ01089423
360947
Alphaproteobacteria
TTT
Lys
>WENV170128841
CENQ01038206
201940
Alphaproteobacteria
CAT
Met
>WENV170129098
CENQ01061999
201940
Alphaproteobacteria
CAT
Met
>WENV170129172
CENQ01068725
201940
Alphaproteobacteria
CAT
Met
>WENV170129248
CENQ01074800
178509
Alphaproteobacteria
CCT
Arg
>WENV170128422
CENQ01003051
435083
Alphaproteobacteria
>WENV170129219
CENQ01072413
435083
Alphaproteobacteria
>WENV170129521
CENQ01105092
212319
Alphaproteobacteria
GTG
His
>WENV170128857
CENQ01040422
228432
Alphaproteobacteria
TGG
Pro
>WENV170128917
CENQ01045544
398994
Alphaproteobacteria
GTT
Asn
>WENV170129645
CENQ01118442
178237
Alphaproteobacteria
CAT
Met
>WENV170129660
CENQ01119963
481099
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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