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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170168210
CEOP01070278
424450
Alphaproteobacteria
GGT
Thr
>WENV170169175
CEOP01169201
404592
Alphaproteobacteria
GGT
Thr
>WENV170168236
CEOP01071651
481268
Alphaproteobacteria
TCC
Gly
>WENV170168947
CEOP01141388
481268
Alphaproteobacteria
TCC
Gly
>WENV170168950
CEOP01141842
481268
Alphaproteobacteria
TCC
Gly
>WENV170168799
CEOP01123082
487436
Alphaproteobacteria
TCC
Gly
>WENV170168461
CEOP01092625
281659
Alphaproteobacteria
TGC
Ala
>WENV170169804
CEOP01238836
305403
Alphaproteobacteria
>WENV170168621
CEOP01107935
29702
Alphaproteobacteria
GGA
Ser
>WENV170168071
CEOP01058659
29729
Alphaproteobacteria
GCT
Ser
>WENV170169027
CEOP01151509
317915
Alphaproteobacteria
GAA
Phe
>WENV170168747
CEOP01118713
435083
Alphaproteobacteria
>WENV170169950
CEOP01247081
400544
Alphaproteobacteria
GGT
Thr
>WENV170167572
CEOP01021399
281650
Alphaproteobacteria
CCA
Trp
>WENV170169196
CEOP01171731
281650
Alphaproteobacteria
CCA
Trp
>WENV170169176
CEOP01169360
212319
Alphaproteobacteria
GTG
His
>WENV170169580
CEOP01218553
398994
Alphaproteobacteria
GTT
Asn
>WENV170168576
CEOP01104008
428327
Alphaproteobacteria
GCC
Gly
>WENV170168575
CEOP01104008
308123
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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