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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170199068
CEPL01072109
299509
Alphaproteobacteria
GTT
Asn
>WENV170198530
CEPL01019215
481268
Alphaproteobacteria
TCC
Gly
>WENV170199508
CEPL01124409
509917
Alphaproteobacteria
TCC
Gly
>WENV170198522
CEPL01018277
75222
Alphaproteobacteria
GAG
Leu
>WENV170199151
CEPL01080458
283596
Alphaproteobacteria
TTC
Glu
>WENV170199144
CEPL01079875
178509
Alphaproteobacteria
CCT
Arg
>WENV170198778
CEPL01041186
281650
Alphaproteobacteria
CCA
Trp
>WENV170198548
CEPL01020593
145377
Alphaproteobacteria
>WENV170199394
CEPL01112182
398994
Alphaproteobacteria
GTT
Asn
>WENV170199402
CEPL01113274
229944
Alphaproteobacteria
CGG
Pro
>WENV170198579
CEPL01022857
296763
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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