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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170326466
CESU01002536
154227
Alphaproteobacteria
CAT
Met
>WENV170326653
CESU01013405
343498
Alphaproteobacteria
GGT
Thr
>WENV170326690
CESU01014630
109657
Alphaproteobacteria
TAG
Leu
>WENV170326711
CESU01015884
241021
Alphaproteobacteria
GGC
Ala
>WENV170326752
CESU01018144
113700
Alphaproteobacteria
>WENV170326754
CESU01018176
163860
Alphaproteobacteria
GGG
Pro
>WENV170326761
CESU01018553
340106
Alphaproteobacteria
GCC
Gly
>WENV170326764
CESU01018876
338282
Alphaproteobacteria
GTT
Asn
>WENV170326765
CESU01018969
249928
Alphaproteobacteria
TAC
Val
>WENV170326787
CESU01020983
340106
Alphaproteobacteria
GCC
Gly
>WENV170326800
CESU01021914
338282
Alphaproteobacteria
GTT
Asn
>WENV170326857
CESU01026292
147334
Alphaproteobacteria
CAT
Met
>WENV170326869
CESU01027273
306070
Alphaproteobacteria
CCA
Trp
>WENV170326886
CESU01028909
161002
Alphaproteobacteria
GTG
His
>WENV170326906
CESU01030363
241021
Alphaproteobacteria
GGC
Ala
>WENV170326907
CESU01030551
340106
Alphaproteobacteria
GCC
Gly
>WENV170327024
CESU01038846
241021
Alphaproteobacteria
GGC
Ala
>WENV170327085
CESU01043382
113700
Alphaproteobacteria
>WENV170327177
CESU01050889
306070
Alphaproteobacteria
CCA
Trp
>WENV170327202
CESU01053921
147879
Alphaproteobacteria
TGG
Pro
>WENV170327244
CESU01058266
147334
Alphaproteobacteria
CAT
Met
>WENV170327296
CESU01063709
148083
Alphaproteobacteria
ACG
Arg
>WENV170327364
CESU01071763
113700
Alphaproteobacteria
>WENV170327516
CESU01088543
109657
Alphaproteobacteria
TAG
Leu
>WENV170327613
CESU01097545
147879
Alphaproteobacteria
TGG
Pro
>WENV170327647
CESU01098597
147083
Alphaproteobacteria
GGG
Pro
>WENV170327721
CESU01103391
147877
Alphaproteobacteria
GTG
His
>WENV170327740
CESU01104128
113700
Alphaproteobacteria
>WENV170327869
CESU01107475
147083
Alphaproteobacteria
GGG
Pro
>WENV170327941
CESU01144240
306070
Alphaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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