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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016547
AZMM01000261
280870
Bacillota
TGC
Ala
>WENV170016632
AZMM01018825
280870
Bacillota
TGC
Ala
>WENV170016584
AZMM01002521
480520
Bacillota
TCC
Gly
>WENV170016586
AZMM01003363
480520
Bacillota
TCC
Gly
>WENV170016593
AZMM01005334
480520
Bacillota
TCC
Gly
>WENV170016609
AZMM01012872
184537
Bacillota
ACG
Arg
>WENV170016563
AZMM01000983
176679
Bacillota
TCT
Arg
>WENV170016583
AZMM01002521
176679
Bacillota
TCT
Arg
>WENV170016607
AZMM01012627
296855
Bacillota
GGT
Thr
>WENV170016637
AZMM01018827
141173
Bacillota
GTA
Tyr
>WENV170016640
AZMM01018827
141173
Bacillota
GTA
Tyr
>WENV170016643
AZMM01018827
141173
Bacillota
GTA
Tyr
>WENV170016567
AZMM01001025
46686
Bacillota
TAA
Leu
>WENV170016634
AZMM01018826
46686
Bacillota
TAA
Leu
>WENV170016541
AZMM01000155
291553
Bacillota
GAA
Phe
>WENV170016588
AZMM01003512
291553
Bacillota
GAA
Phe
>WENV170016646
AZMM01018927
20238
Bacillota
TGA
Ser
>WENV170016585
AZMM01003363
400719
Bacillota
GCC
Gly
>WENV170016592
AZMM01005334
400719
Bacillota
GCC
Gly
>WENV170016635
AZMM01018826
399266
Bacillota
>WENV170016636
AZMM01018827
399266
Bacillota
>WENV170016619
AZMM01018489
280646
Bacillota
TGC
Ala
>WENV170016608
AZMM01012627
184495
Bacillota
CAT
Met
>WENV170016559
AZMM01000874
293309
Bacillota
GTT
Asn
>WENV170016598
AZMM01007458
180748
Bacillota
GAT
Ile
>WENV170016633
AZMM01018825
281300
Bacillota
GAA
Phe
>WENV170016641
AZMM01018827
287736
Bacillota
TAC
Val
>WENV170016638
AZMM01018827
287736
Bacillota
TAC
Val
>WENV170016562
AZMM01000930
480337
Bacillota
TCC
Gly
>WENV170016587
AZMM01003512
280547
Bacillota
GTC
Asp
>WENV170016560
AZMM01000874
289761
Bacillota
TTT
Lys
>WENV170016582
AZMM01002239
289761
Bacillota
TTT
Lys
>WENV170016571
AZMM01001696
289715
Bacillota
TAC
Val
>WENV170016639
AZMM01018827
399260
Bacillota
TGT
Thr
>WENV170016642
AZMM01018827
399260
Bacillota
TGT
Thr
>WENV170016614
AZMM01018329
399107
Bacillota
>WENV170016564
AZMM01000983
288984
Bacillota
TGG
Pro
>WENV170016630
AZMM01018825
288984
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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