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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086062
BABE01001588
179917
Bacillota
CAT
Met
>WENV086225
BABE01015402
179917
Bacillota
CAT
Met
>WENV086077
BABE01001892
497729
Bacillota
CCA
Trp
>WENV086124
BABE01006646
497729
Bacillota
CCA
Trp
>WENV086090
BABE01002861
204381
Bacillota
GAT
Ile
>WENV086182
BABE01012212
201856
Bacillota
GAT
Ile
>WENV086202
BABE01013629
118359
Bacillota
GTA
Tyr
>WENV086223
BABE01015402
118359
Bacillota
GTA
Tyr
>WENV086017
BABE01000390
175857
Bacillota
GTG
His
>WENV086007
BABE01000259
348419
Bacillota
GTT
Asn
>WENV086103
BABE01004612
348419
Bacillota
GTT
Asn
>WENV086239
BABE01016230
348419
Bacillota
GTT
Asn
>WENV086039
BABE01000947
46835
Bacillota
TAA
Leu
>WENV086152
BABE01009457
284723
Bacillota
TAC
Val
>WENV086183
BABE01012212
292374
Bacillota
TGC
Ala
>WENV086002
BABE01000238
291597
Bacillota
TGC
Ala
>WENV086005
BABE01000257
291597
Bacillota
TGC
Ala
>WENV086035
BABE01000945
291597
Bacillota
TGC
Ala
>WENV086008
BABE01000259
398857
Bacillota
TTC
Glu
>WENV086238
BABE01016230
398857
Bacillota
TTC
Glu
>WENV086044
BABE01001237
285601
Bacillota
TTC
Glu
>WENV086018
BABE01000390
401685
Bacillota
TTG
Gln
>WENV086064
BABE01001588
309916
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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