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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV086887
BABG01018802
86865
Bacillota
AAG
Leu
>WENV086869
BABG01016141
274813
Bacillota
ACG
Arg
>WENV086837
BABG01012965
270405
Bacillota
ACG
Arg
>WENV086581
BABG01000097
270405
Bacillota
ACG
Arg
>WENV086595
BABG01000186
270416
Bacillota
CAC
Val
>WENV086778
BABG01008494
270416
Bacillota
CAC
Val
>WENV086893
BABG01020390
270416
Bacillota
CAC
Val
>WENV086897
BABG01020664
112239
Bacillota
CAG
Leu
>WENV086878
BABG01017300
112239
Bacillota
CAG
Leu
>WENV086780
BABG01008609
112239
Bacillota
CAG
Leu
>WENV086769
BABG01007218
112239
Bacillota
CAG
Leu
>WENV086758
BABG01007090
112239
Bacillota
CAG
Leu
>WENV086633
BABG01000858
112239
Bacillota
CAG
Leu
>WENV086729
BABG01005800
472613
Bacillota
CAT
Met
>WENV086813
BABG01011352
284667
Bacillota
CAT
Met
>WENV086577
BABG01000081
270546
Bacillota
CAT
Met
>WENV086947
BABG01029349
270546
Bacillota
CAT
Met
>WENV086927
BABG01024882
466782
Bacillota
CCC
Gly
>WENV086728
BABG01005434
466782
Bacillota
CCC
Gly
>WENV086794
BABG01009600
282468
Bacillota
CGG
Pro
>WENV086599
BABG01000265
653369
Bacillota
CTC
Glu
>WENV086586
BABG01000120
653369
Bacillota
CTC
Glu
>WENV086856
BABG01014323
779385
Bacillota
CTG
Gln
>WENV086759
BABG01007107
779385
Bacillota
CTG
Gln
>WENV086881
BABG01018037
451357
Bacillota
CTT
Lys
>WENV086753
BABG01006625
451357
Bacillota
CTT
Lys
>WENV086598
BABG01000265
451357
Bacillota
CTT
Lys
>WENV086582
BABG01000108
451357
Bacillota
CTT
Lys
>WENV086733
BABG01005899
451336
Bacillota
GAA
Phe
>WENV086791
BABG01009363
451395
Bacillota
GAA
Phe
>WENV086740
BABG01006105
451372
Bacillota
GAA
Phe
>WENV086716
BABG01004574
451355
Bacillota
GAC
Val
>WENV086652
BABG01001611
270399
Bacillota
GAT
Ile
>WENV086583
BABG01000108
270399
Bacillota
GAT
Ile
>WENV086572
BABG01000051
270399
Bacillota
GAT
Ile
>WENV086607
BABG01000480
270399
Bacillota
GAT
Ile
>WENV086735
BABG01005899
661851
Bacillota
GCA
Cys
>WENV086734
BABG01005899
451376
Bacillota
GCC
Gly
>WENV086747
BABG01006225
458649
Bacillota
GCC
Gly
>WENV086657
BABG01001912
455081
Bacillota
GCC
Gly
>WENV086700
BABG01003656
8223
Bacillota
GCT
Ser
>WENV086620
BABG01000567
20504
Bacillota
GGA
Ser
>WENV086967
BABG01034758
466773
Bacillota
GGC
Ala
>WENV086597
BABG01000216
466773
Bacillota
GGC
Ala
>WENV086594
BABG01000167
466773
Bacillota
GGC
Ala
>WENV086959
BABG01033000
282417
Bacillota
GGG
Pro
>WENV086918
BABG01022694
451352
Bacillota
GGT
Thr
>WENV086854
BABG01014283
451352
Bacillota
GGT
Thr
>WENV086797
BABG01009903
153689
Bacillota
GTA
Tyr
>WENV086625
BABG01000612
153689
Bacillota
GTA
Tyr
>WENV086873
BABG01016567
179909
Bacillota
GTA
Tyr
>WENV086742
BABG01006105
179909
Bacillota
GTA
Tyr
>WENV086745
BABG01006105
270488
Bacillota
GTC
Asp
>WENV086566
BABG01000042
270488
Bacillota
GTC
Asp
>WENV086917
BABG01022694
284668
Bacillota
GTC
Asp
>WENV086732
BABG01005899
284668
Bacillota
GTC
Asp
>WENV086911
BABG01022425
270436
Bacillota
GTG
His
>WENV086677
BABG01002735
270447
Bacillota
GTT
Asn
>WENV086548
BABG01000027
454155
Bacillota
TAC
Val
>WENV086831
BABG01012486
465201
Bacillota
TAC
Val
>WENV086909
BABG01022425
779389
Bacillota
TCC
Gly
>WENV086703
BABG01003900
270438
Bacillota
TCT
Arg
>WENV086671
BABG01002645
270438
Bacillota
TCT
Arg
>WENV086699
BABG01003656
86860
Bacillota
TGA
Ser
>WENV086647
BABG01001397
451398
Bacillota
TGC
Ala
>WENV086835
BABG01012843
451398
Bacillota
TGC
Ala
>WENV086859
BABG01015078
451398
Bacillota
TGC
Ala
>WENV086554
BABG01000033
451414
Bacillota
TGC
Ala
>WENV086684
BABG01003157
451414
Bacillota
TGC
Ala
>WENV086694
BABG01003387
451414
Bacillota
TGC
Ala
>WENV086651
BABG01001611
451344
Bacillota
TGC
Ala
>WENV086608
BABG01000480
451344
Bacillota
TGC
Ala
>WENV086584
BABG01000108
451344
Bacillota
TGC
Ala
>WENV086571
BABG01000051
451344
Bacillota
TGC
Ala
>WENV086656
BABG01001882
454988
Bacillota
TGC
Ala
>WENV086864
BABG01015882
454988
Bacillota
TGC
Ala
>WENV086815
BABG01011548
451384
Bacillota
TGG
Pro
>WENV086702
BABG01003674
451384
Bacillota
TGG
Pro
>WENV086832
BABG01012486
458368
Bacillota
TGT
Thr
>WENV086576
BABG01000081
653346
Bacillota
TTC
Glu
>WENV086946
BABG01029349
653346
Bacillota
TTC
Glu
>WENV086868
BABG01016076
656947
Bacillota
TTC
Glu
>WENV086827
BABG01012486
653354
Bacillota
TTC
Glu
>WENV086928
BABG01025501
779387
Bacillota
TTG
Gln
>WENV086913
BABG01022425
451373
Bacillota
TTT
Lys
>WENV086739
BABG01006105
451373
Bacillota
TTT
Lys
>WENV086547
BABG01000027
456233
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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