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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170025882
CDTW01000875
356775
Bacillota
TGT
Thr
>WENV170025910
CDTW01002191
321753
Bacillota
GCC
Gly
>WENV170025919
CDTW01002925
321753
Bacillota
GCC
Gly
>WENV170025940
CDTW01004530
215243
Bacillota
CAT
Met
>WENV170025978
CDTW01007585
190476
Bacillota
CAT
Met
>WENV170025979
CDTW01007585
398832
Bacillota
TTC
Glu
>WENV170025986
CDTW01008264
234991
Bacillota
GAT
Ile
>WENV170025987
CDTW01008264
295166
Bacillota
TGC
Ala
>WENV170026105
CDTW01016923
303718
Bacillota
TGT
Thr
>WENV170026127
CDTW01018622
175859
Bacillota
TCT
Arg
>WENV170026251
CDTW01028759
179917
Bacillota
CAT
Met
>WENV170026248
CDTW01028759
284723
Bacillota
TAC
Val
>WENV170026312
CDTW01032786
179176
Bacillota
ACG
Arg
>WENV170026303
CDTW01032786
284723
Bacillota
TAC
Val
>WENV170026366
CDTW01036732
303718
Bacillota
TGT
Thr
>WENV170026389
CDTW01037856
194260
Bacillota
GAT
Ile
>WENV170026382
CDTW01037856
317482
Bacillota
TAC
Val
>WENV170026419
CDTW01039697
342104
Bacillota
TAC
Val
>WENV170026459
CDTW01042141
184687
Bacillota
CAT
Met
>WENV170026458
CDTW01042141
284723
Bacillota
TAC
Val
>WENV170026493
CDTW01045951
25955
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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