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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170034381
CDYL01001268
175868
Bacillota
GTT
Asn
>WENV170034380
CDYL01001268
398854
Bacillota
CTC
Glu
>WENV170034394
CDYL01002074
175859
Bacillota
TCT
Arg
>WENV170034405
CDYL01002451
99852
Bacillota
GTA
Tyr
>WENV170034406
CDYL01002453
398833
Bacillota
TGT
Thr
>WENV170034415
CDYL01003016
480322
Bacillota
CTG
Gln
>WENV170034435
CDYL01004098
73009
Bacillota
CAG
Leu
>WENV170034462
CDYL01004835
5692
Bacillota
GCT
Ser
>WENV170034461
CDYL01004835
56074
Bacillota
TGA
Ser
>WENV170034464
CDYL01004860
175831
Bacillota
ACG
Arg
>WENV170034501
CDYL01006447
73009
Bacillota
CAG
Leu
>WENV170034502
CDYL01006499
280444
Bacillota
GGT
Thr
>WENV170034515
CDYL01007048
280447
Bacillota
GAC
Val
>WENV170034516
CDYL01007234
280473
Bacillota
TGG
Pro
>WENV170034532
CDYL01008319
280500
Bacillota
TGC
Ala
>WENV170034541
CDYL01009068
186051
Bacillota
GAT
Ile
>WENV170034559
CDYL01009944
321248
Bacillota
TAC
Val
>WENV170034576
CDYL01010867
480324
Bacillota
TTG
Gln
>WENV170034597
CDYL01012940
303718
Bacillota
TGT
Thr
>WENV170034599
CDYL01013223
280486
Bacillota
TGC
Ala
>WENV170034606
CDYL01013462
179917
Bacillota
CAT
Met
>WENV170034603
CDYL01013462
284723
Bacillota
TAC
Val
>WENV170034610
CDYL01013464
280500
Bacillota
TGC
Ala
>WENV170034620
CDYL01014019
280447
Bacillota
GAC
Val
>WENV170034622
CDYL01014028
291581
Bacillota
CGG
Pro
>WENV170034621
CDYL01014028
480322
Bacillota
CTG
Gln
>WENV170034644
CDYL01015286
280500
Bacillota
TGC
Ala
>WENV170034663
CDYL01016350
480322
Bacillota
CTG
Gln
>WENV170034674
CDYL01016610
118669
Bacillota
GTA
Tyr
>WENV170034676
CDYL01016882
291576
Bacillota
CCC
Gly
>WENV170034708
CDYL01018372
322848
Bacillota
CTT
Lys
>WENV170034707
CDYL01018372
398854
Bacillota
CTC
Glu
>WENV170034717
CDYL01019062
406553
Bacillota
TTG
Gln
>WENV170034732
CDYL01019498
229015
Bacillota
GTG
His
>WENV170034731
CDYL01019498
179810
Bacillota
TCT
Arg
>WENV170034769
CDYL01021311
343590
Bacillota
GCC
Gly
>WENV170034785
CDYL01022247
343590
Bacillota
GCC
Gly
>WENV170034786
CDYL01022247
343590
Bacillota
GCC
Gly
>WENV170034820
CDYL01023969
280447
Bacillota
GAC
Val
>WENV170034839
CDYL01024791
323864
Bacillota
TGC
Ala
>WENV170034843
CDYL01024821
321248
Bacillota
TAC
Val
>WENV170034892
CDYL01026328
179755
Bacillota
CCG
Arg
>WENV170034919
CDYL01027298
175842
Bacillota
CAC
Val
>WENV170034945
CDYL01028374
280500
Bacillota
TGC
Ala
>WENV170034958
CDYL01029328
497729
Bacillota
CCA
Trp
>WENV170034966
CDYL01030015
190476
Bacillota
CAT
Met
>WENV170034967
CDYL01030015
398832
Bacillota
TTC
Glu
>WENV170034988
CDYL01030674
284723
Bacillota
TAC
Val
>WENV170034993
CDYL01031416
99852
Bacillota
GTA
Tyr
>WENV170035011
CDYL01032177
303718
Bacillota
TGT
Thr
>WENV170035017
CDYL01032474
398854
Bacillota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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