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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170036023
CDYN01002275
280444
Bacillota
GGT
Thr
>WENV170036171
CDYN01007032
175859
Bacillota
TCT
Arg
>WENV170036179
CDYN01007233
280447
Bacillota
GAC
Val
>WENV170036181
CDYN01007307
201856
Bacillota
GAT
Ile
>WENV170036182
CDYN01007307
292374
Bacillota
TGC
Ala
>WENV170036247
CDYN01008924
291581
Bacillota
CGG
Pro
>WENV170036347
CDYN01012213
175911
Bacillota
GTC
Asp
>WENV170036417
CDYN01014219
480324
Bacillota
TTG
Gln
>WENV170036418
CDYN01014248
280436
Bacillota
TGC
Ala
>WENV170036419
CDYN01014248
175825
Bacillota
GAT
Ile
>WENV170036460
CDYN01014969
175831
Bacillota
ACG
Arg
>WENV170036489
CDYN01015582
280473
Bacillota
TGG
Pro
>WENV170036491
CDYN01015957
175842
Bacillota
CAC
Val
>WENV170036597
CDYN01018918
480322
Bacillota
CTG
Gln
>WENV170036621
CDYN01019359
175849
Bacillota
GTC
Asp
>WENV170036622
CDYN01019359
280444
Bacillota
GGT
Thr
>WENV170036639
CDYN01020045
398832
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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