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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170037374
CDYQ01009880
99852
Bacillota
GTA
Tyr
>WENV170037298
CDYQ01006278
343590
Bacillota
GCC
Gly
>WENV170037679
CDYQ01022139
343590
Bacillota
GCC
Gly
>WENV170037680
CDYQ01022139
343590
Bacillota
GCC
Gly
>WENV170037223
CDYQ01003027
280500
Bacillota
TGC
Ala
>WENV170037671
CDYQ01022106
280500
Bacillota
TGC
Ala
>WENV170037745
CDYQ01024553
280428
Bacillota
GAA
Phe
>WENV170037701
CDYQ01023027
280492
Bacillota
CTT
Lys
>WENV170037759
CDYQ01025389
280492
Bacillota
CTT
Lys
>WENV170038034
CDYQ01036191
280492
Bacillota
CTT
Lys
>WENV170037548
CDYQ01016812
175842
Bacillota
CAC
Val
>WENV170038170
CDYQ01040536
82124
Bacillota
TAA
Leu
>WENV170037393
CDYQ01011062
73664
Bacillota
CAG
Leu
>WENV170037598
CDYQ01018950
73664
Bacillota
CAG
Leu
>WENV170037447
CDYQ01013473
280447
Bacillota
GAC
Val
>WENV170037878
CDYQ01031112
280447
Bacillota
GAC
Val
>WENV170037753
CDYQ01025016
73009
Bacillota
CAG
Leu
>WENV170037196
CDYQ01001815
280646
Bacillota
TGC
Ala
>WENV170037862
CDYQ01030198
291581
Bacillota
CGG
Pro
>WENV170038081
CDYQ01037284
175859
Bacillota
TCT
Arg
>WENV170038167
CDYQ01040368
175859
Bacillota
TCT
Arg
>WENV170037984
CDYQ01034423
280436
Bacillota
TGC
Ala
>WENV170037741
CDYQ01024323
290325
Bacillota
GCC
Gly
>WENV170037922
CDYQ01032341
290325
Bacillota
GCC
Gly
>WENV170037267
CDYQ01005049
175831
Bacillota
ACG
Arg
>WENV170037533
CDYQ01016264
179810
Bacillota
TCT
Arg
>WENV170037344
CDYQ01008688
480322
Bacillota
CTG
Gln
>WENV170037446
CDYQ01013351
480322
Bacillota
CTG
Gln
>WENV170037861
CDYQ01030198
480322
Bacillota
CTG
Gln
>WENV170037618
CDYQ01019959
187364
Bacillota
CAT
Met
>WENV170037614
CDYQ01019765
175868
Bacillota
GTT
Asn
>WENV170038041
CDYQ01036449
175868
Bacillota
GTT
Asn
>WENV170037550
CDYQ01016996
322848
Bacillota
CTT
Lys
>WENV170038070
CDYQ01037179
322848
Bacillota
CTT
Lys
>WENV170037613
CDYQ01019765
398854
Bacillota
CTC
Glu
>WENV170038069
CDYQ01037179
398854
Bacillota
CTC
Glu
>WENV170037758
CDYQ01025386
291576
Bacillota
CCC
Gly
>WENV170037626
CDYQ01020099
480324
Bacillota
TTG
Gln
>WENV170037621
CDYQ01019972
175899
Bacillota
GTC
Asp
>WENV170037974
CDYQ01033885
175899
Bacillota
GTC
Asp
>WENV170037515
CDYQ01015545
303718
Bacillota
TGT
Thr
>WENV170037392
CDYQ01011062
56079
Bacillota
AAG
Leu
>WENV170037783
CDYQ01026789
56079
Bacillota
AAG
Leu
>WENV170037822
CDYQ01028712
323864
Bacillota
TGC
Ala
>WENV170037977
CDYQ01033885
117745
Bacillota
GTA
Tyr
>WENV170038159
CDYQ01040136
117745
Bacillota
GTA
Tyr
>WENV170037334
CDYQ01008320
280444
Bacillota
GGT
Thr
>WENV170037518
CDYQ01015549
280444
Bacillota
GGT
Thr
>WENV170037271
CDYQ01005196
483485
Bacillota
CCC
Gly
>WENV170037818
CDYQ01028565
46835
Bacillota
TAA
Leu
>WENV170037301
CDYQ01006556
398832
Bacillota
TTC
Glu
>WENV170038169
CDYQ01040536
118669
Bacillota
GTA
Tyr
>WENV170038097
CDYQ01038588
294275
Bacillota
TGC
Ala
>WENV170037933
CDYQ01032442
280476
Bacillota
TTT
Lys
>WENV170037979
CDYQ01033885
280462
Bacillota
GAA
Phe
>WENV170037275
CDYQ01005507
398852
Bacillota
CTC
Glu
>WENV170037610
CDYQ01019561
398852
Bacillota
CTC
Glu
>WENV170037925
CDYQ01032345
398852
Bacillota
CTC
Glu
>WENV170038177
CDYQ01040895
398852
Bacillota
CTC
Glu
>WENV170038180
CDYQ01040899
398852
Bacillota
CTC
Glu
>WENV170037695
CDYQ01022633
406186
Bacillota
CTC
Glu
>WENV170037828
CDYQ01028760
406186
Bacillota
CTC
Glu
>WENV170037534
CDYQ01016264
175857
Bacillota
GTG
His
>WENV170037931
CDYQ01032442
175857
Bacillota
GTG
His
>WENV170037454
CDYQ01013598
175857
Bacillota
GTG
His
>WENV170037333
CDYQ01008320
175849
Bacillota
GTC
Asp
>WENV170037744
CDYQ01024553
175849
Bacillota
GTC
Asp
>WENV170037456
CDYQ01013598
280463
Bacillota
TTT
Lys
>WENV170037980
CDYQ01033885
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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